Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1323 ATGGAGAATCTGTTTCGCCTGGTTGATCATGAAGACTTGTTCTCTCGGCGCTGCATTTGGGTGAACGGCCCTGTGATCGTCGGAGCAGGCCCTTCCGGCCTAGCTACGGCGGCTTGTCTCAGAGAACAAGGCGTGCCTTTCGAGGTTCTCGAGCGAGCCGATTGCATAGCTTCTCTCTGGCAGAAGCGAACCTACGATAGGCTCAAGCTTCATCTTCCCAAGCAATTCTGTCAGCTCCCCAAAGTTCCATTCCCAGACGACTTCCCTGAGTACCCTTCAAAGCGACAATTCATCGACTACCTTGAATCGTACGCCAAGCGTTTCCACGTCAACCCACGATTCAACGAGTGTGTTCAATCCGCTAGGTACGACGAGACCTGCGGTTTGTGGCGGGTCAAGACCGTTTCCACCGTCGGCACCACTAGAACTGAGGTCGAGTACATTTGCCGGTGGCTCGTGGTGGCCACCGGCGAGAATGCAGAGTGTGTCATGCCTGATATCCAAGGGTTGGGTGAATTCAAAGGTGAAATCATTCATGCCTGTGATTACAAGTCAGGGGAAAGTTTCAGGGGAAAGAAAGTGCTCGTCGTGGGGTGTGGCAATTCCGGTATGGAACTCTCTCTCGACCTCTGTAACCACAATGCGTCACCGTCAATGGTTGCTCGTAGCTCCGTTCATGTATTACCCAGAGAGATTTTCGGAAAATCAACGTTCAAATTGGCCTTTATGATGTTAAAGTGGCTACCTCTCTGGTTCGTCGACAAGCTCCTATTGGTTCTTGCATGGTTGGTGCTCGGAGACGTTGAGAAATATGGGCTAAAACGGCCATCGGCGGGCCCACTGGAGCTGAAAAACACAAAGGGGAAGACCCCTGTTTTGGACGTTGGAACATTGGAGAAGATTAGATCCGGAGACATAAAAGTTGTACCAGGAATCAAGAGGTTTAACAATCACCAAGTTGAGCTAGTCAATGGTGAAACAACTGATATCGATTCAGTTGTTCTAGCTACAGGATATCGCAGCAATGTCCCTTCATGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGGTTCCCAAAGAGGCCATTTCCACATGGATGGAAAGGAAGTGTTGGTCTTTTTGCAGTCGGGTTTACAAGGAGAGGGTTATCTGGTGCATCTTCTGATGCCATGAAAATTGCTCAAGACATAGGCCAAGTTTGGAAGGAAGAGACTAAGCAAAAGAAGCATAGACCTACTGCTTGCCATAGACGATGCATTTCCCAGTTCTAA 1272 0.4914 MENLFRLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFEVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKVPFPDDFPEYPSKRQFIDYLESYAKRFHVNPRFNECVQSARYDETCGLWRVKTVSTVGTTRTEVEYICRWLVVATGENAECVMPDIQGLGEFKGEIIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVARSSVHVLPREIFGKSTFKLAFMMLKWLPLWFVDKLLLVLAWLVLGDVEKYGLKRPSAGPLELKNTKGKTPVLDVGTLEKIRSGDIKVVPGIKRFNNHQVELVNGETTDIDSVVLATGYRSNVPSWLQEGEFFSKNGFPKRPFPHGWKGSVGLFAVGFTRRGLSGASSDAMKIAQDIGQVWKEETKQKKHRPTACHRRCISQF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1323 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 303 IPR036188 -
Lele05g1323 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Lele05g1323 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Lele05g1323 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Lele05g1323 423 Gene3D - 24 407 IPR036188 -
Lele05g1323 423 FunFam Flavin-containing monooxygenase 24 406 - -
Lele05g1323 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele05g1323 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 395 IPR036188 -
Lele05g1323 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Lele05g1323 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1323 Lele-ChrLele05 8277420 8279016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1323 05 8277420 8279016 Lele05g1323 05 8277420 8279016 ECH
Lele05g1323 05 8277420 8279016 Lele07g1372 07 8327048 8328637 hybridization
Lele05g1323 05 8277420 8279016 Lele08g1174 08 7379527 7381127 hybridization