Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1315 ATGGAAAGGGTCATCGTAGTTGGTGGGGGTAAGTACGCCATGAACCCAATTCTGTTACGCAGTTGTTCACGTTTCATGTTCCTAAGGAAACCACCGCACATTGTATTGCTCTTTCTTCCTTGCTCGAGATTGAAATCGACTGTGCTAGGCATATTAATAAACTTCGATATAACACGGTCCCGTTGCTTTCTGGCTATTGAAATGATGATCCCGGACAGTACATTTCACAATAACGAGAAGCCTTATCCTGGATGCTTGGGAAGAATGGTAAACCTCTTTGATTTGACTGCCGGTGTGACTGGAAACAGGCTGCTTACTGATAAGCAGCATCGTGATGCTTCTCCACTTTCAAGGAGTCAATCAGATGTTGCGAGGATTGCAAGACCTCCTTTTGGTGATCAGCTGGAGGATAAAATGATTGTTTCTGATTTGAGGAGATCGCCATCGAAGAACAAAATAAATGGAACACCTATCAAGATGCTAATAGACCAAGAAATGTCAAAAGAAGTTGATTCCAAGCACAGCCCACCCAATGTTGTTGCCAAATTAATGGGACTTGAATCCCTCCCATGGGAGGAGCCTAATCTAGCAGTGCAGAGAGGCCATAGAAAAGATTATTCTCAACATATATGTGGTCATTCAGGGATGCCATTCAAACGTTGGCAGCTGGAAGATAGATTAATGGACAAGGAAATGCTGAGTGAAGTTCACGAGAGCCCAGAAAAGATTGAACACAAAGATATTTATGAGTTATGGAGGCAATCTCAGAGGACAACAAATGTTAGGGATAAGACAGCTGAGAAAGGAAGGTGGACTGAAGATGTTAATGAGAAAAAAATGGCTCTCATTCGTCAGAAATTTATGGAAGCAAAACGTCTGTCCACAGATGAGAGACTACGGCAGTCAAAAGAATTTGAAGATGCCTTGGAAGTTTTAAGCTCTAATAAAGATCTTTTCCTCAGATTTTTGGATTCTCAAAATCTTTATGAATTTCAACCCACTCCACAACTCCAACCTGCAACTAGGCGTATCACAGTGCTTAAACCTTCAAAGATGCTTGACGATGACAAATCTGCGGTGAAGGGAAGGAAGGATGATAAACAGGTAAAAAAACCGGCAAATGTTGGTCAAGCAGCAGTATGGAACATGAGCCCTGGATATTCTCCAACCTCTCAGAAAGTTGATGATTATCAAGTTCAACATGCTAGAATTGTAGTATTGAAGCCTAGTTCTGGTAAGACTAATGAGTTTAAGGCTGTGGTTTCTCCAACTTGTCCATCACCTCGAAGTTTGCCAAGTGGAATTTTCCATCCTGGAGGTGATGGTGTACCAGAATCAAGGAAAGTGGCTAACGAGATCTCTTGCCAAGGGCATGGAGATCTGTCTGGCCATCGAAAAAGGGATGGAGCTTTGCATTCTTCTGTCTGTTCTAATGGGTACACAGGTGATGAGAGTTCATTCAACAGATCAGAAAATGATTATGCTGCTGGACATTTTAGTGAATTGGAAGTTATGTCACCATCTCCAAGGCACTCATGGGATTATGTTAACCGTTATCACGGTCCTCATTCACCATCATCCTTCAGCCGTGCATCCTATTCTCCTGAGTCATCAGTTTGCAGAGAGGCAAAGAAACGACTTTCTGAAAGATGGGCCATGATAGCATCAAATAAGGGGCCTCAAGAACAAAGGCATCTGCGCAAGAGCTCTTCCTTGGGTGAGATGCTCGCTCTTTCAGATACAAAAAAATCTGTTTCACCAGAGGTTGAGGGTAGCAATAAAGAACAAAAACCAAGGGAATGCAATAATAATACCAATGAAGAAATACAGGCGAATGATTCTCCTAAACATCTTCCAAGGTCAAAATCTGTCCCTGCATCTTCTTCTACTGTCTATGATTCTGGGCTTGGTGGTGAAGTCTGTGATCATGAGGCTGGCAAAGTACATGAATCGAAGGATCTAACGAAGTCAAAAAGCATGAAATCATTTAAAGGGAGAGTTACAAGTTTGTTCTTTTCAAGAAATAAGAAAGCAACTAAGGAAAAATCTAGTCTATTGCTGTCTAAAACTGAACCCCAATCTACTATCACTGAAACATCAGTATCTCTAGCAAATTCTCCTGGAATTATTAGGGATAACACATCTCAGAGCATCAGCAATGGTGGATTTGTAGAGTGTCCTCTTCCTACTCAATATGAATTATCGGGCAAAACTTTGTCTTGTTCACTTTCCAAGGGACAAGACATTACATCTTTAGAGGGTGGATTGACTGGGTCACAGCCCATGATGCCTGGGATATCAAGTGAAAACCAGGAACAGCCGAGTCCAATCTCAGTTTTAGAACCTCTGTTTAGAGATGATAACGCAGCTCAGGAATCCTTGGACGCAATAAAGGCCGGCCACATGGGAACATGGGTGCCTCTGAATTCTAATTTAATTGACAAATCACCACCTATAGAATCAATTGCTCGGACCCTGTCATGGGAAGATTCTTGTGCAGAGGTAGCTACTCGGTATCCTCTGAAATCCTTGACAGTTTCCAGAGACCCAAAGGCAGAGGAACAAGACTGGCTTGTCTCTGTTCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGTCAGACTCGTTTCACTCTAGATGGCATTCCCTTGAAAGTCCATTGAATCCATCATTAAGGGACAAGTATGCCAACAATGAAAAGGAGCCTCTCCATGAGGCCAAACGAAGACAGAGGAGATCAAATCAGAAGCTTATATTTGACTTTGTCAATGCTGCATTAAAGGAGATTACTAGTTATGAATCAGAAATATACTTAATGGGCAGAATGTGCAGTAGGGCCCATGGCAGTTCCGGAGAGGGTACATCTCCTCTACTTGTGGACCTGATAGTGACCCAAATAAAGGAATTAATATCTAGTGAGGGGCATTGTGTTTGGGGAGATTGTGGGGACAGCCACAGCCTGGTGGTAGAGAGGTTTGTCAGAAAAGAAGTTGTGGGAAAAGGGTGGATTGAACTTTTGGGACTGGAGACGGCTAATCTAGGGACGGAGATTGAGGGGAAGTTGCTTGAAGAGCTTGTGGAGGAGGCTGTGGTGGATTTGACTGGTAGGACCCTCTGA 3126 0.4283 MERVIVVGGGKYAMNPILLRSCSRFMFLRKPPHIVLLFLPCSRLKSTVLGILINFDITRSRCFLAIEMMIPDSTFHNNEKPYPGCLGRMVNLFDLTAGVTGNRLLTDKQHRDASPLSRSQSDVARIARPPFGDQLEDKMIVSDLRRSPSKNKINGTPIKMLIDQEMSKEVDSKHSPPNVVAKLMGLESLPWEEPNLAVQRGHRKDYSQHICGHSGMPFKRWQLEDRLMDKEMLSEVHESPEKIEHKDIYELWRQSQRTTNVRDKTAEKGRWTEDVNEKKMALIRQKFMEAKRLSTDERLRQSKEFEDALEVLSSNKDLFLRFLDSQNLYEFQPTPQLQPATRRITVLKPSKMLDDDKSAVKGRKDDKQVKKPANVGQAAVWNMSPGYSPTSQKVDDYQVQHARIVVLKPSSGKTNEFKAVVSPTCPSPRSLPSGIFHPGGDGVPESRKVANEISCQGHGDLSGHRKRDGALHSSVCSNGYTGDESSFNRSENDYAAGHFSELEVMSPSPRHSWDYVNRYHGPHSPSSFSRASYSPESSVCREAKKRLSERWAMIASNKGPQEQRHLRKSSSLGEMLALSDTKKSVSPEVEGSNKEQKPRECNNNTNEEIQANDSPKHLPRSKSVPASSSTVYDSGLGGEVCDHEAGKVHESKDLTKSKSMKSFKGRVTSLFFSRNKKATKEKSSLLLSKTEPQSTITETSVSLANSPGIIRDNTSQSISNGGFVECPLPTQYELSGKTLSCSLSKGQDITSLEGGLTGSQPMMPGISSENQEQPSPISVLEPLFRDDNAAQESLDAIKAGHMGTWVPLNSNLIDKSPPIESIARTLSWEDSCAEVATRYPLKSLTVSRDPKAEEQDWLVSVQKLLSAAGLDDQVQSDSFHSRWHSLESPLNPSLRDKYANNEKEPLHEAKRRQRRSNQKLIFDFVNAALKEITSYESEIYLMGRMCSRAHGSSGEGTSPLLVDLIVTQIKELISSEGHCVWGDCGDSHSLVVERFVRKEVVGKGWIELLGLETANLGTEIEGKLLEELVEEAVVDLTGRTL 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1315 1041 MobiDBLite consensus disorder prediction 587 602 - -
Lele05g1315 1041 Pfam DUF761-associated sequence motif 176 190 IPR032795 -
Lele05g1315 1041 Pfam Protein of unknown function (DUF3741) 284 327 IPR022212 -
Lele05g1315 1041 MobiDBLite consensus disorder prediction 553 640 - -
Lele05g1315 1041 MobiDBLite consensus disorder prediction 752 775 - -
Lele05g1315 1041 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 74 1039 - -
Lele05g1315 1041 Pfam Domain of unknown function (DUF4378) 861 1031 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1315 Lele-ChrLele05 8241584 8247532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1315 79 1037 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.693 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1315 05 8241584 8247532 Lele13g1869 13 26541017 26544711 CCT
Lele05g1315 05 8241584 8247532 Lele14g1809 14 24897685 24901379 CCT
Lele05g1315 05 8241584 8247532 Lele15g0540 15 3189373 3193064 CCT
Lele05g1315 05 8241584 8247532 Lele16g0553 16 3117734 3121428 CCT
Lele13g1873 13 26598546 26603051 Lele05g1315 05 8241584 8247532 CCT
Lele14g1813 14 24953851 24958751 Lele05g1315 05 8241584 8247532 CCT
Lele15g0536 15 3128689 3133700 Lele05g1315 05 8241584 8247532 CCT
Lele16g0549 16 3057727 3060526 Lele05g1315 05 8241584 8247532 CCT
Lele05g1315 05 8241584 8247532 Lele05g1315 05 8241584 8247532 ECH
Lele05g1315 05 8241584 8247532 Lele07g1364 07 8289353 8293534 hybridization
Lele05g1315 05 8241584 8247532 Lele08g1167 08 7342178 7346701 hybridization