Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1306 ATGGCCGGCAAAGGAGAGGGTCCTTCTATTGGAATAGATCTTGGTACGACGTACTCTTGCGTTGGAGTCTGGCAACATGACCGCGTCGAGATTATTGCCAACGATCAGGGTAATCGGACTACGCCGTCTTACGTAGCCTTTACTGACTCCGAGCGTTTGATAGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTTGATGCCAAGAGGTTGATTGGTCGTAGATTCAGTGACACCTCTGTCCAAGATGACATTAAGTTGTGGCCTTTTAAGGTCATTTCTGGCCCTGCTGAAAAGCCCATGATCTCAGTCAACTACAAGGGTGAAGAGAAACAATTCGCTGCGGAAGAAATATCTTCAATGGTTCTGATGAAGATGCGTGAGATTGCTGAGGCCTACCTTGGCTCCACAATCAAGAACGCTGTTGTTACTGTCCCTGCTTACTTTAATGACTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGCCTAAATGTGATGAGAATTATTAACGAGCCTACCGCAGCTGCCATTGCCTATGGCCTTGACAAGAAGGCAACGAGTGTTGGCGAGAAGAATGTGTTGATTTTTGATCTCGGTGGTGGTACTTTTGATGTTTCTTTACTCACTATCGAGGAGGGTATCTTTGAGGTGAAAGCCACTGCCGGGGACACTCATCTTGGAGGCGAGGATTTTGATAACAGGATGGTTAACCACTTTGTGCAGGAATTCAAGAGAAAGAACAAGAAGGACATCAGTGGCAACCCCAGAGCACTTAGGAGGTTGAGGACTGCGTGTGAGAGGGCTAAAAGAACGCTATCTTCCACCGCTCAGACTACCATTGAAATTGATTCTCTGTATGAAGGAATTGATTTCTATGCCCCTATTACTCGTGCTAGATTTGAGGAGCTAAATATGGACCTCTTCAGAAAGTGCATGGAACCAGTTGAAAAATGTTTAAGGGATGCTAAGATGGACAAGAGGAGTGTGCATGATGTTGTTCTTGTGGGTGGATCCACTAGAATCCCTAAAGTTCAGCAACTTCTCCAAGACTTCTTTAATGGAAAGGAGCTCTGCAAGAGCATCAATCCTGACGAAGCTGTGGCGTATGGTGCTGCTGTCCAGGCTGCCATCTTAAGCGGTGAAGGCAATGAGAAGGTCCAGGATCTTCTGCTGTTGGATGTAACCCCACTCTCACTTGGTTTGGAGACTGCTGGTGGGGTGATGACTGTGTTGATCCCCAGAAACACTACTATCCCAACAAAGAAGGAGCAGGTTTTCTCAACCTATTCTGACAACCAGCCTGGTGTGTTGATCCAAGTCTATGAAGGTGAGAGGACCCGAACCCGGGACAACAACTTGCTGGGTAAGTTTGAACTGTCTGGCATCCCCCCTGCTCCTAGAGGAGTCCCCCAAATTACAGTGTGCTTTGATATTGATGCCAATGGTATCCTGAATGTCTCCGCTGAGGATAAGACTACCGGCCAAAAGAACAAAATCACTATCACAAACGATAAGGGCAGATTGTCAAAGGAAGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAGGATGAAGAGCACAAGAAGAAGCTGACAAGAAAAAGATCGATGATGCCATTGAGCAAGCTATCAACTGGCTGGAGGGCAACCAGCTTGCAGAGGCAGATGAGTTTGAAGATAAGATGA 1719 0.47 MAGKGEGPSIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDTSVQDDIKLWPFKVISGPAEKPMISVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKLTRKRSMMPLSKLSTGWRATSLQRQMSLKIR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1306 572 Pfam Hsp70 protein 10 547 IPR013126 GO:0005524|GO:0140662
Lele05g1306 572 Gene3D - 71 126 - -
Lele05g1306 572 PANTHER HEAT SHOCK PROTEIN 70KDA 10 542 IPR013126 GO:0005524|GO:0140662
Lele05g1306 572 MobiDBLite consensus disorder prediction 528 557 - -
Lele05g1306 572 FunFam Heat shock 70 kDa 391 545 - -
Lele05g1306 572 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Lele05g1306 572 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Lele05g1306 572 Gene3D - 192 366 - -
Lele05g1306 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 545 IPR029047 -
Lele05g1306 572 MobiDBLite consensus disorder prediction 528 543 - -
Lele05g1306 572 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Lele05g1306 572 FunFam Heat shock protein 70 10 196 - -
Lele05g1306 572 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lele05g1306 572 FunFam Heat shock 70 kDa protein 71 126 - -
Lele05g1306 572 Gene3D - 10 383 - -
Lele05g1306 572 Gene3D Actin; Chain A, domain 4 235 318 - -
Lele05g1306 572 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lele05g1306 572 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Lele05g1306 572 FunFam Heat shock 70 kDa protein 197 260 - -
Lele05g1306 572 FunFam Heat shock 70 kDa 235 318 - -
Lele05g1306 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 384 554 IPR029047 -
Lele05g1306 572 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Lele05g1306 572 Coils Coil 521 545 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 369 389 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 58 66 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 8 21 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 36 48 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 209 219 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 396 415 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 477 493 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 337 353 - -
Lele05g1306 572 PRINTS 70kDa heat shock protein signature 146 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1306 Lele-ChrLele05 8130874 8133212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1306 1 548 Calmodulin-binding Proteins AT3G09440 94.343 0.0 1075