Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1287 ATGGTTAGAGTCAGCGTCTTGAATGATGCATTAAAAAGCATGTACAATGCTGAAAAACGAGGAAAGCGCCAAGTGATGATTAGACCTTCATCAAAGGTTATCATCAAGTTTCTTATGGTCATGCAGAAGCATGGATACATTGGTGAGTTTGAGTACGTTGATGATCACAGGGCTGGAAAAATAGTCGTCGAACTTAATGGAAGGTTGAACAAGTGTGGAGTTATCAGCCCTCGTTTTGATGTTGGTGTAAAGGAAATTGAGCCATGGACAGCTAGATTGCTTCCTTCTAGGCAGTTTGGCTACATTGTCCTGACGACTTCTGCTGGCATCATGGACCATGAGGAAGCTAGGAGGAAAAATGTTGGTGGGAAGTGGTATGAAGGGCACGAGACAATGGATGCGAAATATGATTCCAGCTTCTCGGATGTTCCATATCAAAGTCACAGCCCTGTAAATTCTTTAAAAAGATTTTTCATTATTTGTTACCCGGGCCCTGGTTCTGGCTCTAGTTCTGAATACCATGAATTAGCAGGGCTAACTAGAAAGCTATCATGCGTCTTATGCTATTCCTTCAAATAG 579 0.4214 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKWYEGHETMDAKYDSSFSDVPYQSHSPVNSLKRFFIICYPGPGSGSSSEYHELAGLTRKLSCVLCYSFK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1287 192 FunFam 40S ribosomal protein S15a 70 126 - -
Lele05g1287 192 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele05g1287 192 FunFam 40S ribosomal protein S15a 1 69 - -
Lele05g1287 192 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele05g1287 192 SUPERFAMILY Ribosomal protein S8 4 124 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele05g1287 192 Gene3D - 1 69 - -
Lele05g1287 192 Pfam Ribosomal protein S8 7 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele05g1287 192 Gene3D - 70 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1287 Lele-ChrLele05 8025181 8026390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1287 1 124 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.774 2.69e-86 248