Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1266 ATGTCTCAACAACCTCCGCCACAGGCTCCGTCGTCCGCGGTGCCCGACAGCTGCCCCGCCGATGACGACAGATGTACCTTCTTCAATCAATCCATGGAGCTCGTCCAACTCCCATATCAAAGGTCAGGCAGAGCCCACATCTCCCGCAGCCCCTCCCTCGCCGACCTACTTAAACGAGTCGGAGATTCTCAAAACGACGCCGTCTCCCAACCACACCGAGTCCTGGACCTCGCTCCTCCTCCCCACTCTTACTCCTTTGTCCTTTCCTTCACCAACTTGACTTACAGCGTCAGAATCCGTCGCAAAATGAGCCTATCCTCTTGCTTCTCTCCGAAACACGTGGATATGGATTCCCCGCCGGAAGTTAATGGCGTTGCTGGATCTGAACCGAAGACTAACGATACTAAAGTTCTACTCAATGGTATTTCCGGCGAGGCCCGAGATGGAGAAATCATGGCCGTTCTAGGCGCCAGTGGGTCCGGTAAATCGACCCTGATCGACGCCCTCGCCAACAGAATTTCCAAAGAGAGCTTGAAAGGAACGATCACGTTAAACGGTGAAGCTTTGGATTCCAGTCTTCTGAAAGTGATTTCAGCTTATGTCATGCAGGACGACCTTCTCTTTCCCATGCTCACCGTGGAAGAGACCCTCATGTTTTCCGCCGAGTTCAGGCTCCCTCGCTCCCTCTCTAAGTCCAGAAAGAAGGCCAGAGTCCAAGCTCTCATCGACCAGTTGGGTCTGCGCAACGCCGCCAATACTGTCATCGGTGACGAGGGCCACCGGGGCGTCTCCGGAGGTGAACGACGTCGTGTTTCCATCGGAATTGATATCATTCACGACCCGATCGTCCTGTTCCTCGACGAACCCACTTCAGGCCTTGACTCAACCAGCGCGTACATGGTCGTCAAGGTGCTACAACGAATAGCTCAAAGCGGAAGCATCGTCATCCTGTCCATACACCAACCAAGTTACAGAATCGTCGGATTATTAGACCAGTTGATTTTCCTCTCGCACGGGCAAACAGTATACTGCGGCTCTCCGGTGAATCTGCCGCGCTTCTTCTCGGAGTTTGGACACCCGATCCCCAATACAGAGAACAGCGCCGAGTTCTCCCTCGATCTCATTCGTGAGCTCGAACAAGACCCTGGTGGAACCGATGGCTTAGTGGAATTCAACAAGTCTTGGCAATCGAATGACATGAAAAGCAAACCCAATAACGGCCATGAAACCACCATTAACGGACAAAGGGTTTCACTCAAGGACGCCATTGGCGCGAGCATTTCTCGAGGCAAGTTAGTCTCTGGGGCGCCAAATAATTCCAATCTCACAACATCTCAGTCTTTTCCAACCTTCGCAAACCCTTTTTGGATCGAAATGGCTGTGATAGCGAAACGATCGCTGATCAATTCCCGAAGGATGCCCGAACTGTTTGGCATTCGATTGGGTGCGGTTCTCGTAACTGGAATCATCCTGGCCACTATCTTCTGGCATCTCGATAGTTCTCCTAAAGGTGCTCAAGAACGAGTAGGGTTCTTCGCCTTCGCCATGTCCACCACCTTCTACACCTGCGCTGAAGCCATGCCTGTGTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCGTACAATGCCTACCGTCGTTCCTCCTACGTTCTGGCCCATTCAATCATCTCGATCCCATCCTTAATTTTCCTCTCCTTAACATTCGCCGCCACGACATTCTGGGCGGTGGGTCTAGCGGGCGGAGCCTCCGGGTTCTTCTTCTACTTATTTATTATCGTGGCGTCTTTTTGGGCAGGAAACTCGTTCGTGACGTTTCTTTCAGGAGTGGTTTCGCACGTGATGTTGGGCTTCACCGTGGTGGTCGCCATTTTAGCTTACTTCGTGCTGTTCAGTGGGTTCTTCATAACCAGAGATAGAATCCCCGCGTACTGGATATGGTTTCATTATATTTCACTGGTGAAGTACCCATACGAAGGCGTGTTGCGGAACGAGTTTGATATTCATCCTCCGAGGTGCTTCGTGAGAGGGACTCAGATGTTCGACATGACGCCGCTGGGGGAGGTGCCGGAGACACTGAAGCTGGAGTTGCTAAAGAGTATGAGCAAGACGCTGGGGATGAACGTAACGGGCTCGACGTGCGTGACCACGGGATTGGATATACTGAAGCAGCAGGGGGTTACGGACCTGAGCAAGTGGAATTGCCTGTGGATAACCATTGCATGGGGATTTTTCTTCAGATTTCTGTTTTATCTGGCTTTGATGTTTGGAAGCAAGAACAAGAGGACCTAA 2295 0.5181 MSQQPPPQAPSSAVPDSCPADDDRCTFFNQSMELVQLPYQRSGRAHISRSPSLADLLKRVGDSQNDAVSQPHRVLDLAPPPHSYSFVLSFTNLTYSVRIRRKMSLSSCFSPKHVDMDSPPEVNGVAGSEPKTNDTKVLLNGISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTITLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSRKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVILSIHQPSYRIVGLLDQLIFLSHGQTVYCGSPVNLPRFFSEFGHPIPNTENSAEFSLDLIRELEQDPGGTDGLVEFNKSWQSNDMKSKPNNGHETTINGQRVSLKDAIGASISRGKLVSGAPNNSNLTTSQSFPTFANPFWIEMAVIAKRSLINSRRMPELFGIRLGAVLVTGIILATIFWHLDSSPKGAQERVGFFAFAMSTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLAHSIISIPSLIFLSLTFAATTFWAVGLAGGASGFFFYLFIIVASFWAGNSFVTFLSGVVSHVMLGFTVVVAILAYFVLFSGFFITRDRIPAYWIWFHYISLVKYPYEGVLRNEFDIHPPRCFVRGTQMFDMTPLGEVPETLKLELLKSMSKTLGMNVTGSTCVTTGLDILKQQGVTDLSKWNCLWITIAWGFFFRFLFYLALMFGSKNKRT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1266 764 Pfam ABC transporter 139 291 IPR003439 GO:0005524
Lele05g1266 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 353 IPR027417 -
Lele05g1266 764 FunFam ABC transporter G family member 6 128 354 - -
Lele05g1266 764 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524|GO:0016887
Lele05g1266 764 SMART AAA_5 148 363 IPR003593 -
Lele05g1266 764 Pfam ABC-2 type transporter 320 377 IPR043926 GO:0140359
Lele05g1266 764 Pfam ABC-2 type transporter 461 667 IPR013525 GO:0016020|GO:0140359
Lele05g1266 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 68 752 - -
Lele05g1266 764 Gene3D - 127 353 IPR027417 -
Lele05g1266 764 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 363 IPR003439 GO:0005524
Lele05g1266 764 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1266 Lele-ChrLele05 7899415 7901709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1266 110 332 Calmodulin-binding Proteins AT2G36910 27.155 1.65e-12 69.3