Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1262 ATGAGGTGCAGGGTACGGGGCTTACGTAGTTTACGAATCATACAAACCGTCCAAAAAGCCGAAGGAGAAGCACATGATCCTATAATGGAAGAAACCTCAACCATATTGGCTGCACTCTCCGCCCTCCCTCCTTCTCAACTCTCCGATCTCGCTCACTCCATCTCCTCCGTCGTCCGCCGCCATCATCTCCGCCTCGCCTCCGTCCTCTCTTCCCAGTCCCTCTTCTCCCTCGCCCTCCACCACCTCCACTCTCTCTCACTCCCCCAGAAGTCCCTCCTCATTGCCCGCCACCTCCTCTCTTCCCTCCACATCCTCACGCGCCTCCTCGAACAGCCGCCGCCTCCATTATCTACGGTCATGAGACAGCGTGACCTCGACGCCGTCCTGCTACTCCTCTTATTCTGCGATGCCCACCAGCACCATCCGCGAGCTCTCGAAGCGCCGGTTTGCGATTGGCGTAGAAATCTGAGCAAGCTCTTCTCCGATAAATTGTTGGGGATAACTTCTGCTCCTATCGGGGAATGCAGTGCCGCGATTTTGATTCCCTATGTTGAGATGGTGATACGGTGCAGGAGGCTGGCGGGCTCAATGGGATGCGGCGGAGGAAAGGGTGGCAGGGAAGTGGCGGCGTCGAGGGCGGCGGTGGCGGCGCTGCCGAGGGTGGAGGTGAGGGCGGGTGGAAGAGAGTGCGTGATATGCAAGGAGGAGATGGGGGTGGGGAGGGACGTGTGCGAACTGCCATGTCAGCACGTGTTTCATTGGAATTGCATATTGCCGTGGCTAAGTAAAAGGAACACGTGTCCCTGCTGCCGGTTCCGGTTGCCGTCCGATGATGTTCTGGGAGAGATCCAACGGCTGTGGGAAGTCTTGGTCAAAGCGTGTGGGGCAGAGTGGGGCGATTGA 903 0.5836 MRCRVRGLRSLRIIQTVQKAEGEAHDPIMEETSTILAALSALPPSQLSDLAHSISSVVRRHHLRLASVLSSQSLFSLALHHLHSLSLPQKSLLIARHLLSSLHILTRLLEQPPPPLSTVMRQRDLDAVLLLLLFCDAHQHHPRALEAPVCDWRRNLSKLFSDKLLGITSAPIGECSAAILIPYVEMVIRCRRLAGSMGCGGGKGGREVAASRAAVAALPRVEVRAGGRECVICKEEMGVGRDVCELPCQHVFHWNCILPWLSKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKACGAEWGD 300
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1262 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 277 IPR013083 -
Lele05g1262 300 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 166 275 - -
Lele05g1262 300 Pfam Ring finger domain 229 271 IPR001841 -
Lele05g1262 300 SMART ring_2 230 270 IPR001841 -
Lele05g1262 300 ProSiteProfiles Zinc finger RING-type profile. 230 271 IPR001841 -
Lele05g1262 300 SUPERFAMILY RING/U-box 227 276 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele05g1262 Lele-ChrLele05 7883480 7886317 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1262 30 293 C3H Transcription Factor Family AT5G02750 51.087 1.31e-81 246