Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1260 ATGGTCGGATCCTGCTGGAAACCATCTGTAGAACGTGAAGATGGAGACTTTAACGGGAGAGTCGATGGATTGCTGTGGTATAAAGATTTGGGTAAGCATGTGTACGGAGAATTCTCAATGGCTGTAATTCAGGCCAATAGTTCTTTGGAAGATCGAAGCCAACTTGAATCTGGACCCTTCACTTCCAACCATTTGGGTCCTCAAGGAACCTTCATCGGTGTCTATGACGGCCATGGCGGATCAGAGGCCTCTCAGTTCGTCTCCGACAATCTCTTATTTCATCTCAAGAGTTTTGCGAGTGAGAAGCAAGGGTTGTCAGAAGATGTGATAAAGAGAGCATTTTATGCAACGGAGGGGGAATTTCTGTCTGTTGTGAAGAAGCAGTGGCTAAGTAGGCCAGAGATTGCATCCACTGGAACATGTTGCTTGGTGGGGATAATCTGCAACGACATGTTATATGTTGCAAATGCTGGGGATTCACGGGTGGTTTTAGGAAGAGAAGAGAAAGCAACGAAAGTTATGGAAGCTATCCAATTATCTGCAGAACACAATGTCAACATTGAAACTGTGAGAGATGAACTTCGTTCCAAGCACCCTTATGATTCACAAATTGTAGTCTCCAAACACAATGTTTGGCGAGTGAAAGGCCTCATACAGGTTTCGAAATCCATCGGCGATGCATATTTTAAGAAGATGGAATTTAACAGGAAGCCCCTGCCGTTGAAGTATAGATTGCCGGAACCAATGTTTAGGCCAATTCTTAGTTGTGAGCCATCGATATCAAGCCATAAACTTGAAGCAAGGGATCGATTTCTCATATTTGCTTCTGATGGATTATGGGAACATCTCAGCAACCAAGAGGCTGTCAACATCGTGAGCAATAACCCACGCAATGGGATTGCAAGGAGGCTTGTGAAGGCAGCACTTAGAGAAGCAGCGAGGAAGAGAGAGATGAGATTGTCGGACCTGCAAAAGATAGGACAAGGAGTGAGGAGACATTTCCATGATGACGTATCTGTAATTGTTGTGTTTCTAAATCCCAAACTTACTCTTAATAATGGCTCCCTCTGTGACCTTCCCCTTTCAATCAGAGGAGGTGGCTCTGCCAACTTTTAA 1116 0.4444 MVGSCWKPSVEREDGDFNGRVDGLLWYKDLGKHVYGEFSMAVIQANSSLEDRSQLESGPFTSNHLGPQGTFIGVYDGHGGSEASQFVSDNLLFHLKSFASEKQGLSEDVIKRAFYATEGEFLSVVKKQWLSRPEIASTGTCCLVGIICNDMLYVANAGDSRVVLGREEKATKVMEAIQLSAEHNVNIETVRDELRSKHPYDSQIVVSKHNVWRVKGLIQVSKSIGDAYFKKMEFNRKPLPLKYRLPEPMFRPILSCEPSISSHKLEARDRFLIFASDGLWEHLSNQEAVNIVSNNPRNGIARRLVKAALREAARKREMRLSDLQKIGQGVRRHFHDDVSVIVVFLNPKLTLNNGSLCDLPLSIRGGGSANF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1260 371 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Lele05g1260 371 FunFam Phosphatase 2C family protein 26 355 - -
Lele05g1260 371 Pfam Protein phosphatase 2C 59 314 IPR001932 -
Lele05g1260 371 CDD PP2Cc 35 345 IPR001932 -
Lele05g1260 371 SMART PP2C_4 31 343 IPR001932 -
Lele05g1260 371 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Lele05g1260 371 Gene3D - 28 352 IPR036457 -
Lele05g1260 371 PANTHER PROTEIN PHOSPHATASE 29 343 - -
Lele05g1260 371 SUPERFAMILY PP2C-like 46 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1260 Lele-ChrLele05 7874772 7876139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1260 1 367 PP2C-type Phosphatase Gene Family AT3G12620 64.324 2.59e-174 488