Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1258 ATGATTTATATTGGATTATCTTTTAGATTGTACGTTAGCTATACTTGCCCTTTCGCACAACGTGTATGGATCACTAGGAATTACAAGGGACTTCAAGACAAGATCAAATTAGTTTCTATCGATCTCGAAGACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTTCCATCGTTGGAACATAACGGCAGGGTTTTGGGAGAAAGTTTGGATTTGATCAAATACGTTGATTCAAACTTTGAAGGGCCATCTTTATTTCCCAGTGATCCTGCCAAGAGCGAGTTCGGTGAGCAGTTGATTTCCCACGTTGATACATTCGTGAGGGAAGGATTCACTTCAATGAAAGCCACATATCCTGTACAACAAGCCAGTCCTGCTTTTGATTTCTTGGAGAATGCTCTTGGTAAATTCGAAGATGGGCCATTCTTCCTTGGCCAATTTAGTTCGGTGGACATTGCCTATGTTCCATTTGTCGAAAGATTCCAAGTCGTCTTTTTTGAGGTTTTCAAGCATGATGTCACAGAAGGAAGGCCTAAACTTGCTGCATGGATTGAGGAAGTGAACAAGATTGGTGCATATACCCAGACAAGAACTGATCCTAAGGAAATCGTTGACGTTTTCAAGAAACGTTTTTTGGCTCAACAGTGA 657 0.4125 MIYIGLSFRLYVSYTCPFAQRVWITRNYKGLQDKIKLVSIDLEDRPAWYKEKVYPENKVPSLEHNGRVLGESLDLIKYVDSNFEGPSLFPSDPAKSEFGEQLISHVDTFVREGFTSMKATYPVQQASPAFDFLENALGKFEDGPFFLGQFSSVDIAYVPFVERFQVVFFEVFKHDVTEGRPKLAAWIEEVNKIGAYTQTRTDPKEIVDVFKKRFLAQQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1258 218 Pfam Glutathione S-transferase, C-terminal domain 123 188 - -
Lele05g1258 218 Gene3D - 85 218 - -
Lele05g1258 218 SUPERFAMILY GST C-terminal domain-like 83 214 IPR036282 -
Lele05g1258 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
Lele05g1258 218 Pfam Glutathione S-transferase, N-terminal domain 10 86 IPR004045 -
Lele05g1258 218 SFLD Glutathione Transferase (cytosolic) 9 191 IPR040079 -
Lele05g1258 218 SFLD Main (cytGST) 9 191 - -
Lele05g1258 218 Gene3D Glutaredoxin 5 84 - -
Lele05g1258 218 FunFam Glutathione S-transferase L2, chloroplastic 2 84 - -
Lele05g1258 218 CDD GST_C_Lambda 92 211 - -
Lele05g1258 218 FunFam Lambda class glutathione S-transferase 85 217 - -
Lele05g1258 218 SUPERFAMILY Thioredoxin-like 8 88 IPR036249 -
Lele05g1258 218 PANTHER GLUTATHIONE S-TRANSFERASE L1 8 214 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1258 Lele-ChrLele05 7867592 7869194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1258 9 215 Glutathione S-transferase Gene Family AT5G02790 67.633 1.91e-107 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1258 05 7867592 7869194 Lele06g1122 06 6989084 6993711 ECH
Lele05g1258 05 7867592 7869194 Lele05g1258 05 7867592 7869194 ECH
Lele05g1258 05 7867592 7869194 Lele07g1304 07 7909996 7911856 hybridization
Lele05g1258 05 7867592 7869194 Lele08g1109 08 6981271 6989146 hybridization