Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1255 ATGGGTTGCATTCCCTGTTCTGGAAATTCAAACACTAAGAAGACGACAAAGAAGAAGCCGAAGAAGATGGAGGTGCAGGAGAACATGGTTGATCCGATAAAAGCAGCCTCAGGGAAGTTGAAGAGAAATTCATCTACAGATTCCAAGGATACCTCTAAAAGTGGGAACTCTGACCACATAGCAGCACAGACTTTCACATTTAGTGAGTTGGCAACTGCAACAAGAAATTTTAGATCTGAATGCATGCTGGGCGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAGTAATCAGGTTGTTGCAATTAAGCAACTTGACCGTAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCACCCTAACCTGGTGAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTTCTCCTGGCAAGAAATGGCTCGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCTGCAAAAGGGTTGGAATATTTGCATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTCGGTGAAAGTTTTCATCCAAAGTTATCTGATTTTGGCTTGGCCAAACTCGGACCAGTAGGCGAGAACACTCATGTGTCAACAAGGGTTATGGGCACCTACGGTTATTGTGCTCCCGAGTATGCAATGACAGGACAACTGACTCTGAAATCAGATGTCTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAATTCAAAGGCTGCTGGAGAACAAAATCTTGTCGCATGGGCAAGACCTTTGTTTAAAGATCGACGAAAATTTTCTCAAATGGTGGATCCAATGCTCCAAGGTCAGTATCCTTCAAGAGGCCTATACCAGGCCCTTGCAGTTGCTGCAATGTGTGTTCAAGAGCAGGCTAACATGCGTCCAGTTATAACTGATGTAGTCACAGCTTTGTCTTACCTTGCTTCACAAAGATACGACCCGAATTCACGGTCACTCCAAAGCTCTCGCCTTTCCCCAGCCACTCCTAGGAGCAGGAGGGGGCAGTGA 1149 0.4413 MGCIPCSGNSNTKKTTKKKPKKMEVQENMVDPIKAASGKLKRNSSTDSKDTSKSGNSDHIAAQTFTFSELATATRNFRSECMLGEGGFGRVYKGRLESSNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKKWLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGESFHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMVDPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVITDVVTALSYLASQRYDPNSRSLQSSRLSPATPRSRRGQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1255 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele05g1255 382 MobiDBLite consensus disorder prediction 363 382 - -
Lele05g1255 382 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Lele05g1255 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lele05g1255 382 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
Lele05g1255 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1255 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Lele05g1255 382 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Lele05g1255 382 SUPERFAMILY Protein kinase-like (PK-like) 59 351 IPR011009 -
Lele05g1255 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1255 382 MobiDBLite consensus disorder prediction 1 57 - -
Lele05g1255 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Lele05g1255 382 PANTHER OS07G0668900 PROTEIN 15 363 - -
Lele05g1255 382 CDD STKc_IRAK 83 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1255 Lele-ChrLele05 7851245 7854059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1255 57 356 Glycoside Hydrolase AT3G07070 70.333 1.15e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele05g1255 PK_Tyr_Ser-Thr 8.3e-46 CL0016