Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1253 ATGACAAGGGGTGCCGATAAAGAATTACAAGAATTGACTCAGCGTCTACGAGTTGGGAAGAAAATCCTTAGTGATGGAGTTAGCGGTGAGGAACTTGGATTTCATGAGAAAAATGAGTTGAAAGTTAATGGAATAGTCGGAGAATTTAAGGTTGGACAAGTGGAGACAGTGAAAAGCCCTGTTGTCCAGCCTATAGTAAAGCAACAGAGTCAAGGGGAAAATGTTTTTTGGGAGAGATTCTTACATCTTGGATCCCTTAAGGTCTTGCTTGTGGAGAATGATAACTCTACTCGCCATGTTGTCAATGCACTGCTTCGCAATTGTTGTTATGAAGTTATTGAAGCAGCAAATGGACTGCAAGCATGGAAGATGTTGGTGGATTTAACTAATCATATTGATCTCATTTTAACTGAGGTGGAAATGCCTTGCTTATCAGGAATTGGTCTTCTATCCAAGATTATGGGTCACCAAACACGGAAGAACATTCCAGTAATTGTGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAATGCTTGTCAAAGGGTGCTGTTGACTTTCTTGTAAAACCCGTACGGAAGAATGAGCTTAAAAATCTTTGGCAGCATGTTTGGAGGCGATGCCATAGTTCTAGTGGAAGTGGGAGTGAAAGTGGCACACAATCCCAAAAGTCTGTAAAATCAAAGAGCCTTGAGAAGTCTGGTAACAACACTGACAGCAATGATGAGGACGACAACAGAAGTGAAGATCTGAATAATAGGAATGGAAGTGACAATGGTAGTGGAACTCAGACTTCCTGGACCAAACAAGCCGTTGAAGTAGACAGTTCCAAACAAGTGCCTCAGTGGGATCAAAGAGTAGACTATCGTGATAGCACCTGCGCTCAATTTGTTCACTCCAATGCTCAAATATGTGATGACAAGATGGTTCCTATGGCCACGAAGTGTTGTCCCAAACATAAGAAACAACTTGCCCTTTCCCCAGATCCTTTCAAAGTCAAAGAGCTGAAAGTTGACTCAAGTAGAGAACTTGACTTAACTGTTGACAATGGAAATGAGCTTCCCGTCAAAATTTCAGTAGCCAAACATGGTATCCATCTTGATGTAGGCTCCTCTAAGTTCAATGGGCAGATTAGTAGAGGACAGCTGGATCTTAATTGTGATAATCCATCTGGCAAGCTAAGACCCAATGGTCCTTCAGTGTCTGATGCCATTACTGGCGAAGAATTTGAAGCCCAAAATAGAAGACCCAAGCTCTCAGATATTGAAAATAAAGCTACTAATGATGACAAGTTACCATCTCCTGGGCTCGGTTTAAAGAGACTTAGAGGAGTAAAAGAGGCTGGAATTACAATTCAGGGCAAACAGAATGTTGCAAGATGTTCAGACCTTTCAGCCTTCTCAAGGTGCAATGCAAGCTCTAACACTAAGAAGTCTCCCACTGGATGTGTCGGAACTGGAAGCAACTCTCCACATAACAATAGCTTAGAAGTTACAAAGAAAGATTTGTCACGTGATATTCAATCTCATTCTAATGGCAATCCTCCCCACCGGAGCTCAAATGGTGCAAGCAATAACATTGATATGGATTCCACTGCTAATAACGCTTTTACTAAAATTGAAGTTTCAAGTGAACCAGCAGTAGCATCAACAGCCAAATGTTTGTACCATGGATCTGCTGTCCAGCCTATAAGCAACGACCTGTGTACCTTTCAACAAGTTGTACTGCATAATAACAAAGATATGACTACTGTGACAATGCTAGCACCAAAAGGACGCATACATAAGGATTGTCCATCTGAGGACTTTCATTGCCAATTTGAAAACCATGACAGTATTGCAGACATGCAGTACCGGCTGCTATCTGACCATGTTGATTCAACGTTAAAGGAAATGGCTGCAACTGCACCACACCATGGGTCATCTAATGTAGTGGAAGTGCTGGTTGAATGTAATATTGGAGATAAAAGTGTCAACAGAAGTATATCAGGCAGCAACAATGGAAGCAATGGACTAAATGGGAGCAGCACTGCTGTTGATGACAGAGGGACAAACAAAGAGGGTGACAATGGAATTGCAGGAAATAATGGAAGCGGTGATGCTAGTGGGAGCGGGAATAAGAGTGTTAACAAGGTAGATCAAAACAAGACTCCCAAGAGAGAAGCATGCTTAAGTAAGTTTCCCCATAAGAGAAAGGAGAGTTGCATCCATAAAAAGGTCCAAAATCAAAGTAGAAAGAAACTAGCTGAACAACGGCCTCACTTTTGTGGACAATTTGTTCACAAGTCCACGAAAGAAAATGAGCCAGAGGCAGATGATAACTGA 2325 0.4168 MTRGADKELQELTQRLRVGKKILSDGVSGEELGFHEKNELKVNGIVGEFKVGQVETVKSPVVQPIVKQQSQGENVFWERFLHLGSLKVLLVENDNSTRHVVNALLRNCCYEVIEAANGLQAWKMLVDLTNHIDLILTEVEMPCLSGIGLLSKIMGHQTRKNIPVIVMSSHDSMGLVFKCLSKGAVDFLVKPVRKNELKNLWQHVWRRCHSSSGSGSESGTQSQKSVKSKSLEKSGNNTDSNDEDDNRSEDLNNRNGSDNGSGTQTSWTKQAVEVDSSKQVPQWDQRVDYRDSTCAQFVHSNAQICDDKMVPMATKCCPKHKKQLALSPDPFKVKELKVDSSRELDLTVDNGNELPVKISVAKHGIHLDVGSSKFNGQISRGQLDLNCDNPSGKLRPNGPSVSDAITGEEFEAQNRRPKLSDIENKATNDDKLPSPGLGLKRLRGVKEAGITIQGKQNVARCSDLSAFSRCNASSNTKKSPTGCVGTGSNSPHNNSLEVTKKDLSRDIQSHSNGNPPHRSSNGASNNIDMDSTANNAFTKIEVSSEPAVASTAKCLYHGSAVQPISNDLCTFQQVVLHNNKDMTTVTMLAPKGRIHKDCPSEDFHCQFENHDSIADMQYRLLSDHVDSTLKEMAATAPHHGSSNVVEVLVECNIGDKSVNRSISGSNNGSNGLNGSSTAVDDRGTNKEGDNGIAGNNGSGDASGSGNKSVNKVDQNKTPKREACLSKFPHKRKESCIHKKVQNQSRKKLAEQRPHFCGQFVHKSTKENEPEADDN 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1253 774 MobiDBLite consensus disorder prediction 713 730 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 508 530 - -
Lele05g1253 774 SMART REC_2 86 201 IPR001789 GO:0000160
Lele05g1253 774 MobiDBLite consensus disorder prediction 759 774 - -
Lele05g1253 774 FunFam Two-component response regulator-like PRR37 86 245 - -
Lele05g1253 774 ProSiteProfiles Response regulatory domain profile. 87 205 IPR001789 GO:0000160
Lele05g1253 774 SUPERFAMILY CheY-like 85 210 IPR011006 -
Lele05g1253 774 MobiDBLite consensus disorder prediction 472 497 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 253 280 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 659 681 - -
Lele05g1253 774 Gene3D - 85 265 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 210 280 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 659 774 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 737 752 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 409 428 - -
Lele05g1253 774 ProSiteProfiles CCT domain profile. 720 762 IPR010402 GO:0005515
Lele05g1253 774 PANTHER TWO-COMPONENT RESPONSE REGULATOR 87 303 IPR045279 GO:0009736
Lele05g1253 774 MobiDBLite consensus disorder prediction 236 252 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 210 235 - -
Lele05g1253 774 Pfam CCT motif 720 762 IPR010402 GO:0005515
Lele05g1253 774 MobiDBLite consensus disorder prediction 388 439 - -
Lele05g1253 774 MobiDBLite consensus disorder prediction 689 712 - -
Lele05g1253 774 Pfam Response regulator receiver domain 88 199 IPR001789 GO:0000160
Lele05g1253 774 MobiDBLite consensus disorder prediction 472 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1253 Lele-ChrLele05 7832213 7838410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1253 162 763 Response Regulator Gene Family AT5G02810 39.677 2.75e-82 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele05g1253 Response_reg 1.2e-20 CL0304