Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1252 ATGAACTTAAGGATGACTATGAGTATGATTCTTTTAGAGAGGATATTGCTGATACAGAGACACGAGTCTTCTAAATACAACACTAAAGATGAATATGCAGATGGCTTTATTGATGATAGTGATATTGACAGTTATCCACCTTTACCTGTCTCAAGTAACGGAGTTGTAATTGAAGAAATAGTAGATGATGATAGGCTTGAAAGTGGAGATAATGCTTCCAAGAAGTCGAAGAAGATTCAAATGGTCAACTCTAAAGGCGGCAAAAATTCTCTGCAGCAAATTTTTGTCAGAGGTGATAAGAGTGTCCAAGTTTTGGAAAGTGAAGATGAAGATGAACTGGACACTGCGGAGGCTATAGTGAAATGGAGTCTACTTGGTGAGAGTTTAGCACAAAAGATCGTTGGAGCTGGACTCGGCTCGATCTTCTTCTCAATTCGATTGCCGCAGCTTGAATTTTCTCGCGCTTCTGTAATTTCAATTGCGGCCATGATCCGCCTGGTAAGGCCCAAATCCTCCATCGCGTGCTTGGCGAGGAGGTGCTTATCTTCATCTGCCGCGTCCGGGGCCAATTCTCACACGCCTCCGTACAATACCTCTTCCATCAATCTGAAGCCTCAGCTTTCACGTAAAGGTCAGGAGCAGGATAGGAATGTTCAGTGGGTCTTCTTGGGTTGTCCCGGCGTCGGCAAAGGTACCTACGCTAGCCGCCTCTCTACTCTGATCGGTGTCCCTCACATAGCCACCGGTGATCTTGTTCGCGAAGAGCTCGCGTCCTCTGGCCCCCTTTCTGCCCAGCTGTCAGAAATTGTAAATCGAGGTAAATTAGTCTCGGATGAAATCATAATCAGTTTATTGTCTAAGAGACTGGCTGCTGGGAAAGCTAAAGGTGAATCAGGATTTATTCTTGATGGGTTTCCTCGAACAATTAGGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTGGTCAATCTGAAGCTCCGAGAAGATGTACTTCTCGAGAAATGCCTAGGTAGGAGAATTTGCAGCCAGTGTGGGGGAAATTTTAACGTGGCCTCCATTGACATCAAGGGTGAGAACGGGATTCCTGGAATTATCATGGCCCCACTTCTTCCACCTGCCTATTGTATGTCAAAGCTTATTGCTCGTTCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGTATATACCACGAAAAGAGCCAACCTGTGGAGGAGTTCTACCGCAGTCGAGGCAAACTATTGGAGTTTGAACTACCAGGAGGGATCCCAGAATCTTGGCCAAAGTTGCTGCAAGCGCTTAATCTCGATGATTACGAGGACAAGCGATCTGCTGCAGCATAA 1353 0.456 MNLRMTMSMILLERILLIQRHESSKYNTKDEYADGFIDDSDIDSYPPLPVSSNGVVIEEIVDDDRLESGDNASKKSKKIQMVNSKGGKNSLQQIFVRGDKSVQVLESEDEDELDTAEAIVKWSLLGESLAQKIVGAGLGSIFFSIRLPQLEFSRASVISIAAMIRLVRPKSSIACLARRCLSSSAASGANSHTPPYNTSSINLKPQLSRKGQEQDRNVQWVFLGCPGVGKGTYASRLSTLIGVPHIATGDLVREELASSGPLSAQLSEIVNRGKLVSDEIIISLLSKRLAAGKAKGESGFILDGFPRTIRQAEILEGVTDIDLVVNLKLREDVLLEKCLGRRICSQCGGNFNVASIDIKGENGIPGIIMAPLLPPAYCMSKLIARSDDTEAVVKERLRIYHEKSQPVEEFYRSRGKLLEFELPGGIPESWPKLLQALNLDDYEDKRSAAA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1252 450 TIGRFAM adk: adenylate kinase 219 438 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele05g1252 450 Gene3D - 204 441 IPR027417 -
Lele05g1252 450 PANTHER NUCLEOTIDE KINASE 195 434 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 438 IPR027417 -
Lele05g1252 450 ProSitePatterns Adenylate kinase signature. 300 311 IPR033690 -
Lele05g1252 450 Pfam Adenylate kinase 223 415 - -
Lele05g1252 450 Hamap Adenylate kinase [adk]. 218 438 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 PRINTS Adenylate kinase signature 221 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 PRINTS Adenylate kinase signature 385 400 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 PRINTS Adenylate kinase signature 402 416 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 PRINTS Adenylate kinase signature 249 263 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 PRINTS Adenylate kinase signature 300 316 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele05g1252 450 CDD ADK 219 421 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1252 Lele-ChrLele05 7823308 7827850 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1252 05 7823308 7827850 Lele13g1811 13 26216577 26218787 CCT
Lele05g1252 05 7823308 7827850 Lele14g1753 14 24604041 24607574 CCT
Lele05g1252 05 7823308 7827850 Lele15g0597 15 3513599 3515784 CCT
Lele05g1252 05 7823308 7827850 Lele16g0611 16 3439581 3441773 CCT
Lele05g1252 05 7823308 7827850 Lele05g1252 05 7823308 7827850 ECH
Lele05g1252 05 7823308 7827850 Lele07g1298 07 7859297 7862084 hybridization
Lele05g1252 05 7823308 7827850 Lele08g1105 08 6959813 6962605 hybridization