Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1232 ATGGCTGTGGGGACCACTGTGCGAAACCCAGGATTGGGTTCTGGTTTTTATGCCGCCCACAGGATCAAATCGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTGCTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAAATCAAGCAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTTGAGATCTCCTCAGACTCATATGTGGGTTCTGAGAAAACTGCACGCTCCTCTGCTCCTCCACCTGAAGAAATTAAAGCATATGATGTTGAGAACGAAGCCAGTCAAAGTCATGTTCGTGAGGTTGCAACTTCCGTGGATTCTGAGAGGCCAATCCCTGCTGTTCAGACAGCAGCTGTCGCAATTCAAGCCCCTAAAATCTCTCGGTTCGCCGGTAAATCAAGGGAAGAGGTGGCTGCAATAAAGGTTCAGACAGCTTTTAGAGGATATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTGGTGAGATTGAGGACAATAATGGAAGGGCAAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGAAGGATCAGAATGTTCGAAGAGAATCAGGCTCTGCAAAGGCAGCTCCTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAGTCCAAAGAACAAATTGAAGCCAAGTTATTACAAAAGTATGAGGCAGCTATGAGAAGAGAAAAAGCGCTGGCTTATGCATTCACTCATCAGCAAACATGGAAGAATTCATCCAGATCGATAAACCCAATGTTCATGGATCCAACAAATCCTGCGTGGGGTTGGAGCTGGCTGGAACGATGGATGGCAGGACGGACATTGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACAATGATCGTTCATCTGTGAGAAGTTGTAGCCGCCGCATCACTGGTGGAGAAATCAGCAAATCATATGCTCGACACCAACTAAATGCTGAAAAGCATTCTCCAACACCAAGCCAAATCCCAGACTCACCTAGCTTCCAATCATATTCAACTCCTTCAAAGCCAGCTTCCAGAGAACTGAAGGCCAGCCCAAAGAACAGCTTTGCAATGGATGATGACATTAAAAGTGGAGCCAGTGCGCAGTCGGCGCGGTTCCGGCGGCACTCCATTGGTGGCGCGTCGGTGAGAGACGATGAGAGCCTTGCTAGCTCCCCGGCGGTTCCGAGTTATATGGTGGCGACTCAGTCTGCAAAAGCCAAGTCTAGGACGCAGAGTCCATTGGCAGCTGAGACTGGCACGCCACAAAAAGAGAGAGGGTCTTTTGGGACAGCAAAGAAACGGCTTTCTTACCCACCGTCACCGGCGAGGCCATGGCGGCATTCAAGTGGGCCACCAAAGGTAGAAAACAACTTAAACGCAGAAATCACTATGAGTAATGGTGGGGCTGCCTAA 1509 0.4824 MAVGTTVRNPGLGSGFYAAHRIKSRNAKKMGRKGNWFSAVKKAFSPESKKKEDQKSSKSKKKWFGKQKFEISSDSYVGSEKTARSSAPPPEEIKAYDVENEASQSHVREVATSVDSERPIPAVQTAAVAIQAPKISRFAGKSREEVAAIKVQTAFRGYLARRALRALRGLVRLRTIMEGQIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSSRSINPMFMDPTNPAWGWSWLERWMAGRTLESRSTMEKEMNNDRSSVRSCSRRITGGEISKSYARHQLNAEKHSPTPSQIPDSPSFQSYSTPSKPASRELKASPKNSFAMDDDIKSGASAQSARFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAETGTPQKERGSFGTAKKRLSYPPSPARPWRHSSGPPKVENNLNAEITMSNGGAA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1232 502 PANTHER IQ-DOMAIN 5-RELATED 30 472 - -
Lele05g1232 502 SMART iq_5 143 165 IPR000048 GO:0005515
Lele05g1232 502 Pfam Protein of unknown function (DUF4005) 414 484 IPR025064 -
Lele05g1232 502 Pfam IQ calmodulin-binding motif 147 165 IPR000048 GO:0005515
Lele05g1232 502 MobiDBLite consensus disorder prediction 42 64 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 44 64 - -
Lele05g1232 502 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Lele05g1232 502 MobiDBLite consensus disorder prediction 484 502 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 432 450 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 313 391 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 96 116 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 432 502 - -
Lele05g1232 502 MobiDBLite consensus disorder prediction 348 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1232 Lele-ChrLele05 7710209 7712937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1232 30 502 IQD Protein Family AT5G03040 51.335 2.15e-147 428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1232 05 7710209 7712937 Lele13g1798 13 26163096 26171223 CCT
Lele05g1232 05 7710209 7712937 Lele14g1744 14 24557081 24559516 CCT
Lele05g1232 05 7710209 7712937 Lele15g0609 15 3569246 3573009 CCT
Lele05g1232 05 7710209 7712937 Lele05g1232 05 7710209 7712937 ECH
Lele05g1232 05 7710209 7712937 Lele07g1278 07 7740589 7743343 hybridization
Lele05g1232 05 7710209 7712937 Lele08g1084 08 6840740 6842545 hybridization