Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1219 ATGAGCGTCATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTATGACAAATACGACATCGACAAGCAGAAGGATTCCAATATCTCCGGCGATGATGCCTTTGCTCGACTCTACGCTGTAGTTGAAGCAGACATCGAGGCAGCTCTTGAGAAAGCAGAAACTGCTTCCAAGGATAAAAGCAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGTTAAAAGGGCTTTCACCACAAGAATTTGCTGCTCGTAATGATTTAGTTCTTGCACTGCCAGAGAGAATCCATGCTATCCCAGATGGGACCCCTTCTGCATCCAAAAACACAGGAGGTTGGGCTTTTTCTGCTTCACATACTGAAATTAGGTTTCATTCAGGTGGTCAATTTGACGATGAATACTTTCAACAAACTGAGGAATCAAGTAAATTTCGGCAAGAGTTTGAAATGCGTAAAATGAAGCAGGCAAAAGGGTTGGATACATTGAAAAACATGGCACACGATATGAATGAGGAACTTGATAGACAAGTTCCATTGATGGATGAGATTGACGCTAAGGTGGAAAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAATTTCTGTATTGACATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAAATCCGGTGTAAAGTTTCTTCATGAAGGCATTCATCACATACTTACAGATATTGCCATGCTGCCTTTGCAGTAG 783 0.4163 MSVIDILTRVDSICKKYDKYDIDKQKDSNISGDDAFARLYAVVEADIEAALEKAETASKDKSRASVVAINAEIRRTKLKGLSPQEFAARNDLVLALPERIHAIPDGTPSASKNTGGWAFSASHTEIRFHSGGQFDDEYFQQTEESSKFRQEFEMRKMKQAKGLDTLKNMAHDMNEELDRQVPLMDEIDAKVEKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYKSGVKFLHEGIHHILTDIAMLPLQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1219 260 SUPERFAMILY SNARE fusion complex 161 206 - -
Lele05g1219 260 Gene3D - 160 217 - -
Lele05g1219 260 Coils Coil 40 60 - -
Lele05g1219 260 CDD SNARE_Qc 160 206 - -
Lele05g1219 260 Coils Coil 184 204 - -
Lele05g1219 260 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 163 208 IPR000727 -
Lele05g1219 260 Pfam SNARE domain 183 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1219 Lele-ChrLele05 7651916 7654202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1219 1 236 SNARE and Associated Proteins AT3G09740 67.176 6.70e-125 354