Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1218 ATGGAGAGAGATCCTAACTTGGAAATTCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGACGAGGAGCTCATTGTTCACTACCTCAGAAACAAAGTTACTTCACGTCCCCTCCCTGCTTCATTCATTGCAGACATAGATCTCTATAAGTTCAACCCATGGGAGCTTCCAAGCAAGACTTTGTTTGGAGGGGATGAGTGGTTTTTCTTTACTCCGAGGGACAGAAAGTATCCGAATGGATTGAGACCTAATAGAGCAGCTGGGTCAGGTTATTGGAAGGCAACGGGGAGTGATAAACCTATTCTTACTTCGTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGTCGTCCCCCTAAAGGATCTAAAACCGATTGGATCATGCATGAGTATAGGTTGCTCGATTCAATGATCTTGAGTTACAAGCAAAGAGGTTCTATGAGACTGGATGATTGGGTGCTGTGTAGGGTTCGTCAGAAAGTCAGCAGCCCTAGAAGCACTTGGGAGGAGTCGAATGAACCTAGTTATGAACCTCCAAGCAACTTGCAAATGATGAATTATGAGAGTCCTGATGCTGATGAAACTGTCAAAAACCGTGTGTTCAATGAATTTCCCATGTTGCCATACATTCTAGCATCTAAGACGAATAATACTCGTCCTTCCATGGGAAATGAATCATCAAGCTTAAGCAGCTATCAGAATGATAATGCTTTTGTCCATGAAGAAGACCCCTCAAACATAGAAGCACAGTTATCAGAATCTACCGAGAGCTTGAAGAGAAAACTCTCTGAACAAAACCAAATGGACCTTTATGATTCTCCTCCCTTTAAGAAGCTAATAAAAGAGGGAGATCATGAGAGGGACATGCTAGACATCGACGTAAGCAAAAGCTACACCAGTGGTTTCAACAGCTTTGATCTTTGGAATGCCATCATACAGCCTCAAGAGCTTAATAACATGGCCTTATCAGGATATATTTGA 996 0.4277 MERDPNLEIQLPPGFRFHPSDEELIVHYLRNKVTSRPLPASFIADIDLYKFNPWELPSKTLFGGDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGSDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILSYKQRGSMRLDDWVLCRVRQKVSSPRSTWEESNEPSYEPPSNLQMMNYESPDADETVKNRVFNEFPMLPYILASKTNNTRPSMGNESSSLSSYQNDNAFVHEEDPSNIEAQLSESTESLKRKLSEQNQMDLYDSPPFKKLIKEGDHERDMLDIDVSKSYTSGFNSFDLWNAIIQPQELNNMALSGYI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1218 331 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Lele05g1218 331 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 258 - -
Lele05g1218 331 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Lele05g1218 331 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
Lele05g1218 331 FunFam NAC domain-containing protein 72-like 20 170 - -
Lele05g1218 331 MobiDBLite consensus disorder prediction 168 188 - -
Lele05g1218 331 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1218 Lele-ChrLele05 7648372 7649609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1218 10 174 NAC Transcription Factor Family AT1G61110 67.052 3.08e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g1218 NAM 3.1e-38 No_clan