Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1210 ATGTCTGAAATATGCAAAAGAGTGACTTTGTTTGCGCTTATATTGCAACTTGCCTTGTCAACCCAGGCTCGACTCGAACCAGCTTCGGCTCCTGTTGTTGTGGAGGAAACAGCAGGAAACGACGACACTCTGTATTACGCCCCTTCTCCATATGGAGACGATAAGTTGGCTGAATCTCCATACCCCTTAGACGACATGGCTTCAGAATTAGAAGGCTATGATGGCCAGTACCCTCCTTCACCTTCATCTTACTCCCCAGGAATAGAAGAGGACTACCCCTACAATGGCGAATATCCTTCTCCTTCACCATCACCTTATATTGATGTAATGGCTCCTGAAGTCGACGATTTTTATGACGATGACTATTCTCCTTCTGAAGCTCCTAGTACCACAGGTTCTGGCAGTTCAATGGCTGCTCCACCGCCAGCAGAGTGGGAATATAGAGCAGAAGACGATGCTGGATTCAGTAGTGGCGAAGATGAAGAGGGTTATGGTGAAGAGAACAAGAGAGGGACGATCGGATTTGTGATAGGGGCGGTTTGTTTAGTGGGATTGGGAGGTTTAGTGTACAAGAGGAGGAAGGCTAATCAGAAGCGTAAACATCCTGTACCATCCCTTGCAAATTGGAATACAATTATAGGACCGCCTTCAACCATTATTCCTGATCATTCTGTCTTCTATCTTCCCTTCGCAATCCGACACCCGCAAGAAAAATCCTCAACTGGACCGAAAGTGAATTCGGATCCCTCGTTTCCATCATTTGATCATGCCACTATAATGGCTTCCAATAGGGGTCAAGGTGGAATTCAACAATTGTTGGCTGCAGAGCAAGAAGCACAGCAGATTGTGAATGCAGCTAAAAATGAAAAATCGGTTAGACTGAAGCAGGCCAAGGAAGAGGCCGAAAAGGAGATTTCTGAATATCGAGCTCAGGTGGAATATGAGTTCCAAAGGAAATTGGAAGAGAGTAGTGGAGATTCTGGTGCCAATGTGAAGCGGCTTGAGCAAGAGACTGAATTAAAGATCAATCACCTCAAGACAGAGGCTGAGAGAATATCTCAGGATGTTGTTTCTATGCTCCTCAAGCATGTAACGACAGTGAGAAATTAA 1110 0.4541 MSEICKRVTLFALILQLALSTQARLEPASAPVVVEETAGNDDTLYYAPSPYGDDKLAESPYPLDDMASELEGYDGQYPPSPSSYSPGIEEDYPYNGEYPSPSPSPYIDVMAPEVDDFYDDDYSPSEAPSTTGSGSSMAAPPPAEWEYRAEDDAGFSSGEDEEGYGEENKRGTIGFVIGAVCLVGLGGLVYKRRKANQKRKHPVPSLANWNTIIGPPSTIIPDHSVFYLPFAIRHPQEKSSTGPKVNSDPSFPSFDHATIMASNRGQGGIQQLLAAEQEAQQIVNAAKNEKSVRLKQAKEEAEKEISEYRAQVEYEFQRKLEESSGDSGANVKRLEQETELKINHLKTEAERISQDVVSMLLKHVTTVRN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1210 369 MobiDBLite consensus disorder prediction 65 142 - -
Lele05g1210 369 Gene3D - 259 369 - -
Lele05g1210 369 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 265 368 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele05g1210 369 FunFam V-type proton ATPase subunit G 262 369 - -
Lele05g1210 369 Coils Coil 335 355 - -
Lele05g1210 369 Coils Coil 269 318 - -
Lele05g1210 369 Pfam Vacuolar (H+)-ATPase G subunit 266 367 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele05g1210 369 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 260 369 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1210 Lele-ChrLele05 7597169 7601717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1210 260 369 Primary Pumps ATPases(2) AT3G01390 78.182 1.33e-42 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1210 05 7597169 7601717 Lele07g1255 07 7620645 7621433 hybridization
Lele05g1210 05 7597169 7601717 Lele08g1060 08 6730146 6734222 hybridization