Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1208 ATGGCCCAAGACCTCGAGGGAGCCGCTCCTCACAAGGACTACCATGACCCCCCTCCCGCCCCTCTCTTCGACGCCACCGAGCTCGGCAAGTGGTCCTTCTACAGGGCCATCATTGCCGAGTTCGTCGCCACCCTCTTGTTCCTCTACATCACCGTCTTGACCGTTATTGGTTACAAAAGCCAGATCGACCCCGCTCACCGGGGAACCGACTGCGACGGCGTCGGCATTCTTGGCATTGCCTGGGCATTTGGCGGCATGATTTTCGTCCTTGTCTACTGCACCGCAGGCATTTCTGGAGGACACATAAACCCAGCCGTGACGTTCGGGTTGTTCCTGGCGAGGAAGGTGTCGCTCATTAGAGCGATTATGTACATGGTGGCTCAGTGCCTGGGAGCCATATGTGGGTGTGGCTTGGTCAAGGCTCTCCAGAAGGCCTACTACAACAGGTATCAGGGTGGAGCCAACATGTTGTCTTCTGGCTATAGCAAAGGCACCGGTTTGGGTGCTGAGATTATAGGTACCTTCGTCCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAATGCCAGAGACTCTCACGTTCCCGTGCTGGCTCCTCTTCCAATTGGATTTGCGGTTTTCATGGTTCACCTGGCCACCATCCCCATCACGGGCACCGGCATCAACCCGGCCAGGAGCTTTGGGGCCGCAGTCATGTACAACAATCAGATGGCATGGGATGACCACGTATGTTTGGATCTTCTGGGTCGGACCCTTCATTGGCGCCGCCATCGCTGCAATTTACCATCAATACGTGTTGAGAGCTCAGGCGGCCAAAGCTCTGGGGTCTTTCAGGAGCAGCTCCAATTTGTAATTTTCACGGGGGGCCGGAGCAGTATCAGCTTCATCTCCGGGGACTGCCGAGGAGGATGGATGAGGCTGAAGCTGAAGTGA 939 0.5623 MAQDLEGAAPHKDYHDPPPAPLFDATELGKWSFYRAIIAEFVATLLFLYITVLTVIGYKSQIDPAHRGTDCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGCGLVKALQKAYYNRYQGGANMLSSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQMAWDDHVCLDLLGRTLHWRRHRCNLPSIRVESSGGQSSGVFQEQLQFVIFTGGRSSISFISGDCRGGWMRLKLK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1208 312 FunFam Probable aquaporin PIP1-2 20 269 - -
Lele05g1208 312 Gene3D Glycerol uptake facilitator protein. 20 256 IPR023271 -
Lele05g1208 312 SUPERFAMILY Aquaporin-like 28 241 IPR023271 -
Lele05g1208 312 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Lele05g1208 312 Pfam Major intrinsic protein 28 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 TIGRFAM MIP: MIP family channel proteins 39 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele05g1208 312 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 251 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1208 Lele-ChrLele05 7593115 7594408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1208 1 281 Major Intrinsic Protein MIP AT2G37170 73.077 2.12e-146 413