Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1204 ATGCGCCCACCAAACGAAGAGGCGAAATTCAGTGTCCCCTCCATTCGGCAACGCTACTGCTCTAAGGAATCCCCTGGCATAAAACCCGACACCAGTTTGTTGGATTTCTGTACCAAGCTGCCCATCATCCAGGGACGAGATGGCAAACTTAAATCAAAGATGATTACGTTTATGGATTCCAAAGAAAAACTGAAAGAGGCGGACAAGTGTTTGGATCCTCCGCTATGGTATGCTTGTGCTGGTGGGATGGTGCGGATGCCATCAATTAATGGTAAAGTTGTTTACTTTCCTAAAGGTCATGCAGAGCATGCATGTGCAACAGTGGACTTCAAGACTTGTCCCAAGATTCCACCTCAGATTCTATGTAGAGTTATGGCTATCAAATACATGGCTGATCCTGACAGTGACGAGGTTTATGCCAGAATTAAGCTTCTCCCTCTTAATTCAAATGAAATTAATTATGATGGGGATCTAATTAGCGAAACGAATGGTTCTGAAACGCAAAATAAAGCCGCTTCATTTGCAAAAACCTTGACTCAATCAGATGCCAACAATGGTGGGGGCTTCTCCGTTCCTAGATATTGTGCCGAGGCCATTTTTCCTCGCTTAGACTACTCTGCAGATCCTCCCGTTCAAACCATCCTCGTTAAAGATGTGCATGGAGAAACATGGAAATTCAGGCACATTTATAGAGGCCCACCGAGGCGTCATCTACTCACAACAGGGTGGAGCACTCTTGTAAATCACAAAAAGTTGGTTGCTGGTGATTCTATTGTATTTTTAAGAGAAAAAATGGAGATCTCTGTGTTGGAATTCGATGAGATAAACGAGGAATCAACGGCATTCCAAACTCTTGTTCATCATGCTGGAATTCAACAAGAGGGAATTATCCTCAGCCTTCTTAAGTCACATTTGAGGTTGATTATTACCACAGGACAAGTACTCCGGAGTTGTGTGAAGGCCTCCTTGGTTATAGCAGCTCTACAAATTAGGTGGTTCTCTGGAATGAGGTTCAAGATGGCCTTTGAAACTGACGATTCCTCGCGTATAAGTTGGTTCAAGGGAACGATATCTACAGTTCAAGTTGCTGATCCTCTTCGCTGGCCTGATTCACCTTGGAGGCTTCTCCAGGTTTCATGGGACGAGCCAGATCTACTACAGAATGTGAAAAGGGTAAGCCAGCGGTTGGTTGAATTGGTATCAAACATGTCTGCAATTAATCGTTCCTCTTTCCCATCACCACTGAAGAAAATGAGATTACCTCAACACCCAGATTTTCCCTTGAATTGTGTACCAGAGAGTCCTCCTGCTGGCACGCAGGGAGCCAGGCATGCTTATTATGGTCTATCCTTATCTGATCTCCACCTCAATAAACTGCAATCCAGTCTATTTCTGACCAGTTTTCAGCCTCCTGATCACCCTGCATCACCCTTGGGGATCTTCAATAACCCCACAGTGAAAGAACTTAGCACGAGTAAGAACATCTCTTGTGTCCTATCTTTGGAATGTTCTGCTCAGTCTTCAAAGAAACAGGACGATATGAAGACAACCCATCATCAGCTTATGCTTTTTGGTAGAACTATTCTTAGAGAAAATAGTTCGTCGGATAGAAATGCGGATAACTTGACCAAGTTTTCTGATCTCCAACATGACAAGGATAATCACGTTAAAGTTTTTTTGGAATCAGAAGATGTTGGTCGCACTATGGAGCTCTCGTTGCTGGGGTCTTATGATGAATAG 1740 0.4368 MRPPNEEAKFSVPSIRQRYCSKESPGIKPDTSLLDFCTKLPIIQGRDGKLKSKMITFMDSKEKLKEADKCLDPPLWYACAGGMVRMPSINGKVVYFPKGHAEHACATVDFKTCPKIPPQILCRVMAIKYMADPDSDEVYARIKLLPLNSNEINYDGDLISETNGSETQNKAASFAKTLTQSDANNGGGFSVPRYCAEAIFPRLDYSADPPVQTILVKDVHGETWKFRHIYRGPPRRHLLTTGWSTLVNHKKLVAGDSIVFLREKMEISVLEFDEINEESTAFQTLVHHAGIQQEGIILSLLKSHLRLIITTGQVLRSCVKASLVIAALQIRWFSGMRFKMAFETDDSSRISWFKGTISTVQVADPLRWPDSPWRLLQVSWDEPDLLQNVKRVSQRLVELVSNMSAINRSSFPSPLKKMRLPQHPDFPLNCVPESPPAGTQGARHAYYGLSLSDLHLNKLQSSLFLTSFQPPDHPASPLGIFNNPTVKELSTSKNISCVLSLECSAQSSKKQDDMKTTHHQLMLFGRTILRENSSSDRNADNLTKFSDLQHDKDNHVKVFLESEDVGRTMELSLLGSYDE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1204 579 SMART B3_2 174 275 IPR003340 GO:0003677
Lele05g1204 579 ProSiteProfiles B3 DNA-binding domain profile. 174 273 IPR003340 GO:0003677
Lele05g1204 579 FunFam Auxin response factor 332 405 - -
Lele05g1204 579 Pfam B3 DNA binding domain 174 263 IPR003340 GO:0003677
Lele05g1204 579 Gene3D - 172 273 IPR015300 -
Lele05g1204 579 CDD B3_DNA 173 264 IPR003340 GO:0003677
Lele05g1204 579 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 69 267 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele05g1204 579 SUPERFAMILY DNA-binding pseudobarrel domain 167 265 IPR015300 -
Lele05g1204 579 Gene3D - 332 406 - -
Lele05g1204 579 FunFam Auxin response factor 172 271 - -
Lele05g1204 579 Pfam Auxin response factor 318 377 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1204 Lele-ChrLele05 7568097 7571630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1204 54 579 B3 DNA Binding Superfamily AT4G30080 46.240 2.07e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele05g1204 B3 3.7e-18 CL0405