Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1201 ATGGGTGAAATTCAGAGGTTTCAGTGGAGCGCTGTGGCTTCTGGTAGATCAAAATCTGTAAGCTATGTATGTGAATTCAGGTTTCAGGATAACCTTGAGCAAGACATATTGATGGATAGCATAGAAAGTCCCATGTCGACGAAGCCAGATTATAAGATGAAAGCAAGAAACGTGTTGATGCAGAGAAAGAAACTTTCAAGGGTGTTTTCTGAGGATTATGATGCATCGAAAAGGAAGATCTTCGACCCGAGGGGACCAAGAGTAAACAGATGGAACAAAATGTTCTTAGTAGCATGCTTGATTTCACTATTTGTGGATCCCTTCTTCTTTTACTTGCGAGAGGCTAAGACAGACAAGTGCATTGCTATCTCTGTTGGATTCGAAGTTTCGCTCACCACAATTCGGTCCTTGGTTGATGCATTTTACATCATTCATATATTTATTCGGTTTCAAACTGCTTACGTTGCTCCTTCCTCTCGTGTTTTTGGTAGAGGGGAGCTTGTTATTGACCCTTCAAAGATTGCATCAAGGTACCTCCAAAAGGACTTCTGGCTTGATCTTCTTGCAGCCCTCCCTCTTCCACAGGTGTTGATTATAGCTGTAATTCCAAATCTAAGGGGGTCACAAATGATTGCTTCAAGGCAGAGTCTGCGACTTGTGATCATTGTCCAATACTTGTTAAGGTTATATCATATCTTCCCTCTTTCATCTGAAATAGTAAAGGCAAATGGAGTAATGATGGAAAAAACCTGGGCTGGGGCAGCTTATAACCTTACGCTTTATATGCTAGCAAGTCATGTCTTAGGATCCTCCTGGTACCTGTTGGCAATCGAAAGGCAAGATGAATGTTGGAAAAAAGCTTGTAATCTTGAGTTCCCATACTGTCAATACCGTTATCTTGACTGTCAGAGTATAATTGATACCGCCAGAGCAGCTTGGTTTAGATCAAGCAACCTGTCAACTTTATGTGATAAGAACAGTGATTTCTTTCAGTTTGGTATTTTTGCCGATGCTCTCACTCTGGAAATGGCGGACTCAAAGTTCTTAAGCCGATATTATTATTGTCTTTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCCTAACCAGCACTAACGTTGGAGAGATAAATTTTGCAGTGATTATTGCAATTCTTGGATTGGTGCTTTTTGCACTCCTAATAGGAAATATGCAAACGTACCTGCAATCAACTACTTTGCGACTGGAAGAGTGGAGAATAAGACGCACGGATACAGAACGATGGATGCATCATAGGCAGTTACCTCATTACTTGAAGCAAAGTGTGAGACGCTATGACCAATACAGATGGGTAGCTACGAGGGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTCGATATCAGACGCGACATCAAACGCCACCTGTGTCTCAACCTAGTTCGACAAGTACCACTGTTTGATCAGATGGACGAGAGAATGCTAGACGCAATATGTGAGAGACTGAAACCTTGTCTGTGTGTTCAAGGAACGCTCCTAGTTCGCGAAGGAGATCCTGTGACTAAAATGCGCTTTATCATTCGAGGACGTCTAGATTCTTGTACCACTAACGGTGGCAGAACCGGGTTCTTCAACTGTTGTAGAATCGGACCGGGTGATTTCTGTGGCGAGGAGCTATTGCCATGGGCTCTGGACCCACGTCCAAGTGTAGTTCTTCCTTCATCAACTCGCACAGTGAAAGCCCTAACAGAAGTGGAAGCTTTCGCACTTGTAGCTGAAGACTTGAAATTTGTGGCGGCTCAGTTCAGGAGGCTACACAGCAAGCAACTGAGGCACACGTTTAGGTCTCACTCTCATCAATGGAGGGCATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTTAGATATAAGAGAAGAAAAGAAGCGAGTCAGTCAATTAATCATAAGGAGGATGTCAGTGAAACTAAGGTGGAACATTTCTCTGCGCCTTTGCACTTGCAACCTTGGATAGGTTCGAGTACTACAATGTACAAAGCGGCCAACTTGGGATGTAGCCAAAGGAAAGGTGGAAGCTTGCGATATGGATCTGAACTTGATATTATTGGTTCACTCATCAGGAAGCCCCTTGAACCTGACTTCAGTACTGTTGAAGATTGA 2148 0.439 MGEIQRFQWSAVASGRSKSVSYVCEFRFQDNLEQDILMDSIESPMSTKPDYKMKARNVLMQRKKLSRVFSEDYDASKRKIFDPRGPRVNRWNKMFLVACLISLFVDPFFFYLREAKTDKCIAISVGFEVSLTTIRSLVDAFYIIHIFIRFQTAYVAPSSRVFGRGELVIDPSKIASRYLQKDFWLDLLAALPLPQVLIIAVIPNLRGSQMIASRQSLRLVIIVQYLLRLYHIFPLSSEIVKANGVMMEKTWAGAAYNLTLYMLASHVLGSSWYLLAIERQDECWKKACNLEFPYCQYRYLDCQSIIDTARAAWFRSSNLSTLCDKNSDFFQFGIFADALTLEMADSKFLSRYYYCLWWGLRNLSSLGQNLLTSTNVGEINFAVIIAILGLVLFALLIGNMQTYLQSTTLRLEEWRIRRTDTERWMHHRQLPHYLKQSVRRYDQYRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPCLCVQGTLLVREGDPVTKMRFIIRGRLDSCTTNGGRTGFFNCCRIGPGDFCGEELLPWALDPRPSVVLPSSTRTVKALTEVEAFALVAEDLKFVAAQFRRLHSKQLRHTFRSHSHQWRAWAACFIQAAWFRYKRRKEASQSINHKEDVSETKVEHFSAPLHLQPWIGSSTTMYKAANLGCSQRKGGSLRYGSELDIIGSLIRKPLEPDFSTVED 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1201 715 Gene3D Helix hairpin bin 411 474 - -
Lele05g1201 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 661 - -
Lele05g1201 715 Pfam Ion transport protein 91 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele05g1201 715 ProSiteProfiles cAMP/cGMP binding motif profile. 483 568 IPR000595 -
Lele05g1201 715 Gene3D - 94 407 - -
Lele05g1201 715 CDD CAP_ED 483 612 IPR000595 -
Lele05g1201 715 SUPERFAMILY cAMP-binding domain-like 413 605 IPR018490 -
Lele05g1201 715 SMART cnmp_10 483 614 IPR000595 -
Lele05g1201 715 SUPERFAMILY Voltage-gated potassium channels 82 405 - -
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 352 369 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 446 453 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 396 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 378 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1201 715 FunFam Cyclic nucleotide-gated ion channel 1 481 599 - -
Lele05g1201 715 Gene3D Jelly Rolls 481 601 IPR014710 -
Lele05g1201 715 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1201 Lele-ChrLele05 7544800 7547918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1201 53 712 Ion Channels AT2G28260 64.242 0.0 879