Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1192 ATGAAGAGAAAGTTTCTGAGAGTGTGGCTTAACAAGTGGAAGAAAATGAAGAGTCGTGTGATACCTTGGTGTGCCTGTGAGCATTGCAGTAAATGGGCCTTTTGGTCGTCCATGCATGAAGGAAGATCGATCCCAAGTGATGTCCCAAAGGGTCACCTTGTGGTGTATGTAGGGGAGAATTTCAAGAGATTTGTAATCAAGGTCACATTACTGAACCATCCATTCTTCAAGGCATTGCTGGATCAAGCTCGGGAAGAGTACGATTTTGTTTCTTATTCAAAACTTTGCATCCCTTGCGACGAGCGTCTTTTCCTCAGTGTCCTTCGCTGTGCTAGCTCTCCCAAGAACGAAGGAGCGAGTCTTTGTATTTGA 372 0.4489 MKRKFLRVWLNKWKKMKSRVIPWCACEHCSKWAFWSSMHEGRSIPSDVPKGHLVVYVGENFKRFVIKVTLLNHPFFKALLDQAREEYDFVSYSKLCIPCDERLFLSVLRCASSPKNEGASLCI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1192 123 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
Lele05g1192 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1192 Lele-ChrLele05 7484807 7485178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1192 46 113 Calmodulin-binding Proteins AT4G34750 51.389 4.12e-21 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1192 05 7484807 7485178 Lele05g1192 05 7484807 7485178 ECH
Lele05g1192 05 7484807 7485178 Lele07g1238 07 7502224 7502595 hybridization
Lele05g1192 05 7484807 7485178 Lele08g1044 08 6628604 6628981 hybridization