Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1189 ATGAAGTGTTGCTTTTCTATAGTTTTATCTTCAAGTTTTCATCTCATTTCTGAAAATACAGATCAATCCGTTGCAATGAAGTGTTTTCCATTCCACTATGGAGAGAAGAAGGAAGAACCACCGATGAGCGTGAAGTCAGCTTCGGGTCGCTCCAACAGTTCCACAAATGCCGAGGATGCTGTGAGAAGATCTGGTTCTGAATTGAATTCCAAGGATCAGTCAGAAAACAGTGCAGAGTCCCTTAGGAGGACTGCGTTACCCAGTTTGTCTCAAAGACCCAGCGACCTGAAAGTTTTCACTGTTCCTGAACTAAAATCAGCCACAAAGAATTTCAGTCGCTCTGTTATGCTTGGAGAGGGAGGGTTTGGATGTGTATTCAAGGGATTGATCAAGAGTGGAGAGGATCCTAACAGAAAACTTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGCCATAAGGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCACTTATCACCCCGTTCAGAGAATCCTCTCTCATGGAATAGAAGATTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGGTTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTCCTGGATGAGCGTTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTTGGAACAATGGGATATGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCCAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAGCTCTTGGAATGGGCAAGGCCATACTTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAACACGTTTTTAAGTCAGCTCAAAGACTTGCTATTGTAGCTAACCGATGTTTACTAAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGCACAATCTTCATTGAGTACAAGTCCAGAGCTACCCCTGAAGAATTTTGCATCGGCTCAAGTGTCGCAAGAAACCAAATTAAAGAACAAGAGAGGGATTATGGACCTGAAACATGGAGAAACTAACTGGTTTTTCAGGATATGGAGACCGAAACATCAAAGAGCTAGTTGA 1356 0.4307 MKCCFSIVLSSSFHLISENTDQSVAMKCFPFHYGEKKEEPPMSVKSASGRSNSSTNAEDAVRRSGSELNSKDQSENSAESLRRTALPSLSQRPSDLKVFTVPELKSATKNFSRSVMLGEGGFGCVFKGLIKSGEDPNRKLEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWNRRLKIAEDAARGLTYLHEEMGFQIIFRDFKSSNILLDERWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWARPYLSDGKKFQLILDPRLERKHVFKSAQRLAIVANRCLLKNPKNRPKMSEVLDMVNQIAQSSLSTSPELPLKNFASAQVSQETKLKNKRGIMDLKHGETNWFFRIWRPKHQRAS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1189 451 PANTHER OS01G0588500 PROTEIN-RELATED 70 396 - -
Lele05g1189 451 ProSitePatterns Protein kinases ATP-binding region signature. 117 145 IPR017441 GO:0005524
Lele05g1189 451 MobiDBLite consensus disorder prediction 37 86 - -
Lele05g1189 451 ProSiteProfiles Protein kinase domain profile. 111 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1189 451 CDD STKc_IRAK 117 395 - -
Lele05g1189 451 MobiDBLite consensus disorder prediction 45 63 - -
Lele05g1189 451 Gene3D Phosphorylase Kinase; domain 1 84 196 - -
Lele05g1189 451 MobiDBLite consensus disorder prediction 70 86 - -
Lele05g1189 451 FunFam Serine/threonine-protein kinase BIK1 77 196 - -
Lele05g1189 451 SUPERFAMILY Protein kinase-like (PK-like) 88 392 IPR011009 -
Lele05g1189 451 Gene3D Transferase(Phosphotransferase) domain 1 197 410 - -
Lele05g1189 451 Pfam Protein kinase domain 113 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1189 451 FunFam Serine/threonine-protein kinase PCRK2 197 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1189 Lele-ChrLele05 7466048 7469440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1189 26 405 Glycoside Hydrolase AT3G07070 43.333 2.12e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele05g1189 Pkinase 5.1e-47 CL0016