Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1184 ATGATTCGGTCTTTGATTGAGAGAATAGTGCAGAAGGGTCTCTTGCTCCTCGTGGGCAGAAGATCTGCACGCCGCCAGCTGGATGAAGAAGAAGAAGAAGTAGCAGTAGCAAATAATAAGATGGTGCCGGCAGACGTAATGGACGGCCATTTTGCGGTTCTGGCCATCGAAGGTAAGGAAACGAAGAGGTTTATCCTTGAACTGGACTACTTGGCCGAACCGGAGTTCTTGGAGCTGCTGGACCGGGCTCGGGAAGAGTATGGTTTTGGACAGCGAGGAGCTCTTTCAGTGCCTTGCCGCCCTCAAGAATTAGAGAAGATTCAGGAGAGTCGCAGCAGGAGAAACTCGCTTTCAACATAG 360 0.5083 MIRSLIERIVQKGLLLLVGRRSARRQLDEEEEEVAVANNKMVPADVMDGHFAVLAIEGKETKRFILELDYLAEPEFLELLDRAREEYGFGQRGALSVPCRPQELEKIQESRSRRNSLST 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1184 119 Pfam Auxin responsive protein 31 107 IPR003676 GO:0009733
Lele05g1184 119 Coils Coil 20 40 - -
Lele05g1184 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1184 Lele-ChrLele05 7432489 7432848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1184 4 99 Calmodulin-binding Proteins AT3G43120 35.417 2.21e-12 58.5