Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1170 ATGTTACGTAAAGGGCCTTGGCTACATGAAGAAGACGAACAACTCACAACCTTGAACCTTCGTTACTTGACTCAGGAGAAGTGGCAAGAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCGCCCTTTTAGTGTTGAAGAAGAGCAACTCATTATTCAACTTCACCAGCAATGGGGTAACAAGTGGTCAAAGATTGCGCGCAGTCTACCTGGAAGAACGGACAACGAAGTCAAGAATTATTGGAGAACTCATTTCAGAAAGAAAGCACGACTTGAACAACAAGATGAGTTCCAATATAAACCAGACAACACTGAACAAGGTGGCTTCAGTGAGAAAAACATGAATGATAACCCTTGCGAGGATTACAACCAAATGAACCTTGAATGTCAAGAAAATGTTGGGGAGACTCAGGATAATTTCTTTCAAGCTTTTCCGCCATCAGAATGGGAAATGACTAGTTCACCATACGAGATTCGAGTATCAGATTGGATAGCAGAACTGCAAAAAGATGACAATGAAACAGAATATGAACATCATTGTAATATCAGAGTCCACTGA 576 0.4132 MLRKGPWLHEEDEQLTTLNLRYLTQEKWQELQVEVDELSSSKSEAWRPFSVEEEQLIIQLHQQWGNKWSKIARSLPGRTDNEVKNYWRTHFRKKARLEQQDEFQYKPDNTEQGGFSEKNMNDNPCEDYNQMNLECQENVGETQDNFFQAFPPSEWEMTSSPYEIRVSDWIAELQKDDNETEYEHHCNIRVH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1170 191 SUPERFAMILY Homeodomain-like 41 100 IPR009057 -
Lele05g1170 191 ProSiteProfiles Myb-like domain profile. 48 91 IPR001005 -
Lele05g1170 191 SMART sant 45 93 IPR001005 -
Lele05g1170 191 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 48 148 - -
Lele05g1170 191 CDD SANT 48 91 IPR001005 -
Lele05g1170 191 Pfam Myb-like DNA-binding domain 48 90 IPR001005 -
Lele05g1170 191 Gene3D - 47 121 - -
Lele05g1170 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 95 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1170 Lele-ChrLele05 7337687 7338617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1170 48 180 MYB Transcription Factor Family AT3G53200 39.130 1.59e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele05g1170 Myb_DNA-binding 3.2e-15 CL0123