Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1144 ATGAACAGCAACAGCAACAACGTTGAAGGCCAAGGCCAAGTAGGCTACTTTGTCAACCCTCTCATCATCTCCGGCGCTGGCATCATCTGCTCCTGCGTCGCCTTAGCCACCTACCACTTCATCCTCTTCAGGCTCTGCCTTCAAGGCCGACGACAATTGCAGCAAATCGCCCATCCAATAAGTCCCCCCGCCGATGACATTCCCTGCGGCGTCGACCCTGAAATCCTCAAGAAAATCCCAATCCTGCCTTACTCTCACAAGAAAGACGATGCCTTTCGTTTGGATCAAACTGAATGCGCGATTTGCTTGGGCGAATTGCAGGATGGAGAAAAGGTTCGACTATTGCCTTCTTGTACCCATGCATTTCACTTACCTTGTATCGATCTCTGGTTCGCCCAGAATTCCAATTGTCCCATTTGTCGAGCGCCGTTAGTTATAACCCCTGCGCCGTCCCCGCCGGTGGCTTCAGAAACTTTTGTTGATGCTCAGGAAATAAGGGGGTGTCATCAAAGTGATCATCATAATAATAAGATCGTTGCTTCTGATCTTTTGATGAGTGCTTCTGGCTCGACGTCACGAGGAGGCCATCTCCGCGCGGCCACGCTTCGGCACTCTCTCTCTCTGGCGTATCGTCACGAGCAGGAAAAGCCTCAGGATTTGATGAAGAGGGGGATGAAGAGGTCTCTGTCCATGGATCATTCGTCATATGTTTCTGTCAGCATACAAAGAGACGAGGAAAATAATAAATCTGCTTCTTCTTCTTCTTCTTCCCCTGTTGCTACAGGGATTGGGATTGCGCATGCTAAAGCGCTTGATCAGGTGTCGTCCATGTTGATGATGTCTTTCTCGCAGTTTTGGAACGGTAGAAATGAGAGATCCAAAGGCATTCTACCGAATTGA 900 0.4933 MNSNSNNVEGQGQVGYFVNPLIISGAGIICSCVALATYHFILFRLCLQGRRQLQQIAHPISPPADDIPCGVDPEILKKIPILPYSHKKDDAFRLDQTECAICLGELQDGEKVRLLPSCTHAFHLPCIDLWFAQNSNCPICRAPLVITPAPSPPVASETFVDAQEIRGCHQSDHHNNKIVASDLLMSASGSTSRGGHLRAATLRHSLSLAYRHEQEKPQDLMKRGMKRSLSMDHSSYVSVSIQRDEENNKSASSSSSSPVATGIGIAHAKALDQVSSMLMMSFSQFWNGRNERSKGILPN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1144 299 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 164 IPR044675 -
Lele05g1144 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 146 IPR013083 -
Lele05g1144 299 SMART ring_2 99 140 IPR001841 -
Lele05g1144 299 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Lele05g1144 299 CDD RING-H2_PA-TM-RING 98 141 - -
Lele05g1144 299 MobiDBLite consensus disorder prediction 234 259 - -
Lele05g1144 299 SUPERFAMILY RING/U-box 91 148 - -
Lele05g1144 299 Pfam Ring finger domain 98 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1144 Lele-ChrLele05 7154124 7155023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1144 27 252 C3H Transcription Factor Family AT5G17600 26.482 4.27e-24 98.6