Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1141 ATGAAGCTTCTAGACCAGAACTTCGCGCCCAACCAACCGGGAACGGTCAAGATCATCCCCGAAGAACCCGACGACTTATGGGTGGTTTACAACCTCATCGCCAACGGAGACGTCGTCACCGCCGATACAACTCGCAAAGTTCACCCGCAGTCCACCAAGAAAACCGCCTCACGTGTCAAACTCACCATCCCCATCAAAGTCACGTGCCGCTACTTCCACAAAGATTCTGCCACCGTGCGCGTTCAAGGCAGGAACATCGAGGACAACCAGTACGTCGCCGCCGGCTCATTCCACACCTTGACCCTCGAAAAGAACAAAGGCTTCGAACTCTCCAAAAAGATTTGGGATCCGACTGCTGTGGCATCATTATCCGAAATCTCCGAGAAATCATCAGGCGCTGACCTCGCCGTGGTTCTTATACAAGAGGGCCAAGCAGAGGTTTATTTGGTGGGGAACGGATTAACCACGCTCTGCTCTAAAACCGAAGCTTCACGGAAAAGAAAGAAATCAGCCAGCAGCGTGTTTTTCCAAGACATCTTTAATGCGTTTGTGAAGCACGTGGATTTCAGCAGCGTTAAAAGCGTAATGATAGCTAGTGCTGGATCGACGAAGGACGAGTTTCGGAGTTTTCTGCTGTCGGAAGCTAAAAGATTGAAGATGAGAACAATCGAGGACAATAAGTCGAGAATCGCGGTGGCAGACTGTAAGGGCGATCTGAAGGAGGTGCTGAATGACGATGGGTTGATGAATATGATAAAAGATAGCAAGGCCGTGTTGGAGATTAGAGCTATCCAAGAGATGTGGGACTTGGTGGAAAAGGGTTCGGGTAGGGCATGTTATGGTCCGAAGAGCGTGGAGGCGGCGCAGGAGATGACGGCGATTGAGACGCTGCTGATAACGGACGATCTGTACAGAAGCTCAGATGTGAAGACGAGGCACAAGTATACGGATTTGGCTAAATCAGTGAGAAAGGGAGGAGGGAAGGTTCTGGTATATTCCTCCATGCATGTCTCAGCACAACAGCTTGCCCAGCTCACGGGAGTCGCAGCGATTCTGAGGTTTCCCTTACCCGACCTTGATGACGATGACGTGGATGTTTAA 1101 0.5059 MKLLDQNFAPNQPGTVKIIPEEPDDLWVVYNLIANGDVVTADTTRKVHPQSTKKTASRVKLTIPIKVTCRYFHKDSATVRVQGRNIEDNQYVAAGSFHTLTLEKNKGFELSKKIWDPTAVASLSEISEKSSGADLAVVLIQEGQAEVYLVGNGLTTLCSKTEASRKRKKSASSVFFQDIFNAFVKHVDFSSVKSVMIASAGSTKDEFRSFLLSEAKRLKMRTIEDNKSRIAVADCKGDLKEVLNDDGLMNMIKDSKAVLEIRAIQEMWDLVEKGSGRACYGPKSVEAAQEMTAIETLLITDDLYRSSDVKTRHKYTDLAKSVRKGGGKVLVYSSMHVSAQQLAQLTGVAAILRFPLPDLDDDDVDV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1141 366 Gene3D Pelota, domain A 1 129 IPR038069 -
Lele05g1141 366 FunFam Protein pelota homolog 256 366 - -
Lele05g1141 366 TIGRFAM pelota: mRNA surveillance protein pelota 2 356 IPR004405 GO:0070481|GO:0070966|GO:0071025
Lele05g1141 366 Gene3D eRF1 domain 2 133 252 IPR042226 -
Lele05g1141 366 FunFam Protein pelota homolog 1 129 - -
Lele05g1141 366 Pfam eRF1 domain 2 135 236 IPR005141 -
Lele05g1141 366 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Lele05g1141 366 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 126 IPR038069 -
Lele05g1141 366 Pfam eRF1 domain 1 1 125 IPR005140 -
Lele05g1141 366 SUPERFAMILY L30e-like 250 356 IPR029064 -
Lele05g1141 366 SMART eRF1_1_2 1 128 IPR005140 -
Lele05g1141 366 SUPERFAMILY Translational machinery components 131 257 - -
Lele05g1141 366 Gene3D - 254 365 IPR029064 -
Lele05g1141 366 Pfam eRF1 domain 3 260 356 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1141 Lele-ChrLele05 7120094 7121194 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1141 05 7120094 7121194 Lele05g1141 05 7120094 7121194 ECH
Lele05g1141 05 7120094 7121194 Lele07g1185 07 7143484 7144584 hybridization