Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1126 ATGGAACCCAATGGACTTGGTGGTGGAATGTTTTCTAGCGTCAGTTCTGGTTTGCTTGGAGTAGAAAATCCGTTACAGCAGCAGCAGCAACAACAAAACCTGTCGAATCCTCAAAATCCTCATCCTATGCATCATTCTCAAATGGTTTCTTACGCTTCTTCGCACCATGAAACTGATATTCCTCAAGCACCGACCCAACAATCGATCAAGCATGGGTACCCTTATCCGGCGAAGATCAATCAACAAATGGCTCTCAGTGACGATGATGAAGGCGGTTTTGGAGCAGAGGACAACGTTAGCTCTGGAGATAAGAGGAAAGTGTCGCAGTGGCACAGAATGAAGTGGACGGATACTATGGTTAGGCTTTTGATAATGGCGGTTTATTACATTGGCGATAATGAAGGGGGTTCAGAAGGGGCTGATAAGAAGAAACCTGCGGGTCTGTTGCAGAAGAAAGGCAAATGGAAATCGGTGTCAAGGGCTATGATGGAGAAGGGTTTTTTCGTGTCTCCTCAGCAATGTGAAGACAAGTTTAATGATTTGAATAAGAGGTACAAGAGAGTGAACGATATTCTGGGTAAAGGAACAGCTTGTCTGGTGGTGGAAAATCACAGCTTGTTGGAGACGATGGACTTGTCACCAAAAAGGAAGGAGGAAGTTCGAAAATTGCTGAATTCTAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCACAATAGTTGTGGCCATGGCGGCGCCACCTGTGGGCCGCCGCAACAACAACAATCCCCGGAGGTGGGAACAGAGCCAACTCAAGCGCCTCCTCAACCACAACAACAGCACCAACGGTGTTCGCACTCGTCGGAAGTTGGGATGGTGAATTTGGGAAAGCCAGAATTAGAAGGACTCAAGATTTCTAAAGAGGTAAGCAGGGAAGAGGATGAAGACGACGAAGAAGATGATGAGTCGGAGGATTCTTCTGATGAGGACGAAGAAGAGTCAGGAGAAGGAGTTTCAAGGGGTCATAAAACTGGGAACGCACATGAGTTAGACGACGTTGAGAATTATGAAGGAAGGCCATCGACGAAGAGATCAAGAAAAGAAGAAATCTGTTGGTCGTCATCAAAGCTAATGCAGGAAACGAGCAATGAAGTGATGGGTGTGTTACAAGATGGAGGAAGAAGTGCGTGGGAGAAAAGGCAATGGATGAAGAGGAAGGTAATGCAGTTGGAGGAACAACAACTGAGGTATGAGGTAGAAGCGTTCGAGCTGGAGAAGCAGAGACTGAAATGGGCGAGATTTAGCAGCAAGAAAGAGAGGGACATGGAAAGAGCCAAGATTGAGAATCAAAGGAGGCAGCTGGAGAATGAGAGGATGGTTTTGCTGTTACGCCGGAAGGATCTTGAGCTGATGAGTCAATCTTCACCATCACCAGCGACGACAACAGCGGCAGCCGCTGCGGCAACATTCTTCTAA 1455 0.4694 MEPNGLGGGMFSSVSSGLLGVENPLQQQQQQQNLSNPQNPHPMHHSQMVSYASSHHETDIPQAPTQQSIKHGYPYPAKINQQMALSDDDEGGFGAEDNVSSGDKRKVSQWHRMKWTDTMVRLLIMAVYYIGDNEGGSEGADKKKPAGLLQKKGKWKSVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENHSLLETMDLSPKRKEEVRKLLNSKHLFFREMCAYHNSCGHGGATCGPPQQQQSPEVGTEPTQAPPQPQQQHQRCSHSSEVGMVNLGKPELEGLKISKEVSREEDEDDEEDDESEDSSDEDEEESGEGVSRGHKTGNAHELDDVENYEGRPSTKRSRKEEICWSSSKLMQETSNEVMGVLQDGGRSAWEKRQWMKRKVMQLEEQQLRYEVEAFELEKQRLKWARFSSKKERDMERAKIENQRRQLENERMVLLLRRKDLELMSQSSPSPATTTAAAAAATFF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1126 484 MobiDBLite consensus disorder prediction 248 282 - -
Lele05g1126 484 PANTHER F16F4.11 PROTEIN-RELATED 1 466 - -
Lele05g1126 484 MobiDBLite consensus disorder prediction 328 363 - -
Lele05g1126 484 MobiDBLite consensus disorder prediction 305 327 - -
Lele05g1126 484 Coils Coil 400 420 - -
Lele05g1126 484 MobiDBLite consensus disorder prediction 26 72 - -
Lele05g1126 484 Coils Coil 430 464 - -
Lele05g1126 484 MobiDBLite consensus disorder prediction 26 69 - -
Lele05g1126 484 Pfam Myb/SANT-like DNA-binding domain 112 236 IPR044822 -
Lele05g1126 484 Gene3D - 115 187 - -
Lele05g1126 484 MobiDBLite consensus disorder prediction 248 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1126 Lele-ChrLele05 7032381 7033835 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele05g1126 Myb_DNA-bind_4 1.5e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1126 05 7032381 7033835 Lele05g1126 05 7032381 7033835 ECH
Lele05g1126 05 7032381 7033835 Lele07g1169 07 7063199 7064653 hybridization
Lele05g1126 05 7032381 7033835 Lele08g0977 08 6202803 6204113 hybridization