Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1122 ATGAACAAGCCTTATGCATTAAACCTGGCTTTCGCCTTCGCCTTCACTTTGGCTTTCCTCTGCTTTACGGCATCTCTGTGTTTAGATCAGAATGACACCCAAGTGCTCACTCTGTTCCGCCTCCAGACCGACGCTCATGGCTATCTCCTCTCTAATTGGACCGCAGGCGACGCTTGCTCCGCCACGTGGCGCGGCGTCTACTGCTCCTCCAACGGCCGAGTCGTCTCCCTTTCTCTACCTTCCCTCAATCTCCGAGGACCTATTGACTCACTCTCGTCGCTTGTGCACCTTCACCTCCTTGACCTTCATGATAATCGTTTAAACGGCAGCATTGCGGCTCTCTCCAACTGCACCCGCCTCAGGCTCCTTTACCTCTCCCACAACGACTTCTCCGGCCAGATTCCCCCGGGAATAGCTTCTCTTAAGCATTTACTAAGACTTGACCTTTCTGACAACAACATCCATGGTCCAATTCCCAACGAACTCTCTTCGTTAACTCACCTTCTCACGCTTCGCCTACAGAACAATGTTCTCTCTGGGCAAGTTCCGGATCTCTCTGTTTCGCTTGTTAATCTCACAGAGCTCAATTTCACCAACAACGAGCTCTACGGACGCTTACCGGATGGAATGTTGAAGAAATTCGGCGACAAAACCTTCTCTGGCAATGAAGGTATATGTGGCTCAACCCCATTCCCGATGTGTTCTTTCATAGATAGCCCTCCTTCTTCCGCATCACCGCCGCAGATAGTTCCTTCGAACCCAAGTTCGTTGCCTGAATCTCAAACCAGCATAATTGTCACACCCAAAACGCAACGGGGAAAGGGGTTAAGCCCCGGAGCTATAATAGCGATAGTGGTGGCGAATTGCGTGGCATTGTTGGTGGTAACCTCTTTCATCGTGGCTCAATGTTGCGCAAGAGGACGAAGCTCAAACTCGATGGTGGGTAGTGAAAATGGGAAGAGAAAAAGTGGCAGTAGTGGCTCCGGAAGTGAGAAGAAGGGGTACGCCAATAATGGGGGAGCAGACAGCGATGGCACTAGCGGCACAGACCGAAGCAGGCTTGTGTTCTTCGACCGTCGGAATCAATTCGAGCTGGAGGAATTGCTCCGTGCATCGGCGGAGATGCTGGGAAAAGGCAGCTTGGGGACGGTTTATAAGGCGGTGCTTGATGACAGTTCTACCGTGGCGGTGAAGAGACTTAAGGACGCAAACCCATGCGCCAGGAATGAGTTCGAACAGTACATGGAGATCATCGCAAAGGTCAAGCACCCCAACATTGTCAGATTCAGAGCATACTACTACGCCAAAGAAGAAAAACTTCTTGTCCATGATTATCTCCCCAACGGAAGCTTGCATTCTCTTCTTCATGGAAATCGTGGTCCAGGAAGAATTCCACTAGATTGGACCACAAGAGTAAGCTTGGTGTTAGGTGCAGCAAGAGGGCTGGCTCGTATTCATGCAGAATACAATGCAGCCAAAATACCTCACGGAAACGTCAAATCTTCGAACGTGCTTCTTGACAAGAACGGCGTCGCTTGCATCTCCGACTTCGGCTTGGCCCTGTTACTGAACCCTGCTCACGCCATTGCCAGATTGGGTGGATACAGAGCTCCAGAACAAGCAGAAGTGAAGTGGCTGTCTCAGCATGCAGACGTATACAGTTTTGGAGTCTTACTATTGGAAGTTCTCACCGGGAGAGCTCCTTCGCAGTACCCTTCACCGGTTCGACCTACCGCCGACGAAGAGGAACAAGACGTGAATCTGCCCAAATGGGTTCGATCCGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTGTTGCGTTACAAGAACATAGAGGAAGAACTGGTTTCAATGCTTCATGTGGGGCTGGCTTGTGTGGTTTCACAGCCAGAGAATAGGCCAACAATGGCGGCAGTAGCTAAGATGATTGAGGAGATAAGGGTGGAACAATCTCCATTAGCAGAGGACTATGATGAATCGCGCAATTCACTATCACCATCCATTGCCACGACTGAAGATGGCCTTCCTTGA 2043 0.5037 MNKPYALNLAFAFAFTLAFLCFTASLCLDQNDTQVLTLFRLQTDAHGYLLSNWTAGDACSATWRGVYCSSNGRVVSLSLPSLNLRGPIDSLSSLVHLHLLDLHDNRLNGSIAALSNCTRLRLLYLSHNDFSGQIPPGIASLKHLLRLDLSDNNIHGPIPNELSSLTHLLTLRLQNNVLSGQVPDLSVSLVNLTELNFTNNELYGRLPDGMLKKFGDKTFSGNEGICGSTPFPMCSFIDSPPSSASPPQIVPSNPSSLPESQTSIIVTPKTQRGKGLSPGAIIAIVVANCVALLVVTSFIVAQCCARGRSSNSMVGSENGKRKSGSSGSGSEKKGYANNGGADSDGTSGTDRSRLVFFDRRNQFELEELLRASAEMLGKGSLGTVYKAVLDDSSTVAVKRLKDANPCARNEFEQYMEIIAKVKHPNIVRFRAYYYAKEEKLLVHDYLPNGSLHSLLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYNAAKIPHGNVKSSNVLLDKNGVACISDFGLALLLNPAHAIARLGGYRAPEQAEVKWLSQHADVYSFGVLLLEVLTGRAPSQYPSPVRPTADEEEQDVNLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPENRPTMAAVAKMIEEIRVEQSPLAEDYDESRNSLSPSIATTEDGLP 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1122 680 MobiDBLite consensus disorder prediction 656 680 - -
Lele05g1122 680 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele05g1122 680 FunFam pollen receptor-like kinase 1 340 445 - -
Lele05g1122 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 652 - -
Lele05g1122 680 MobiDBLite consensus disorder prediction 240 260 - -
Lele05g1122 680 Gene3D Transferase(Phosphotransferase) domain 1 446 671 - -
Lele05g1122 680 FunFam Nuclear pore complex protein NUP107 29 184 - -
Lele05g1122 680 MobiDBLite consensus disorder prediction 309 347 - -
Lele05g1122 680 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Lele05g1122 680 Gene3D Ribonuclease Inhibitor 25 116 IPR032675 -
Lele05g1122 680 SUPERFAMILY L domain-like 30 210 - -
Lele05g1122 680 ProSiteProfiles Protein kinase domain profile. 370 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1122 680 Pfam Protein kinase domain 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1122 680 CDD STKc_IRAK 376 650 - -
Lele05g1122 680 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 660 - -
Lele05g1122 680 Gene3D Ribonuclease Inhibitor 117 235 IPR032675 -
Lele05g1122 680 MobiDBLite consensus disorder prediction 309 333 - -
Lele05g1122 680 Gene3D Phosphorylase Kinase; domain 1 345 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1122 Lele-ChrLele05 7011894 7014070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1122 25 676 Receptor kinase-like Gene Family AT2G36570 66.717 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele05g1122 Pkinase 5.2e-34 CL0016