Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1119 ATGGAAGAAAGTGTGTCGGCTTCAACCCCACAACCTCTCAGAACATCTCTGCCTCAGGCAACAAACAACAGTGCAGGGGCAATAGTGGTTGCAGAACCAGTGACAACGCCGGCGAGTGGCGGCGGCCAAGGCAGCTTTGATTTGTTGGGGAAGAAGAAGAGAGGAAGGCCCAGAAAATATGACTCTGAAGGCAATTTAACGACGTCGTACCAGAAGCACCAGGCTGCCTCCGCCTTCCCTTTCTCCTCCAAAAAGGCTCGACCCAAGCCTCTACCCCACATCTTTGCATCCTTTGGTGGGTTTTTTGCAAGCACAGCTGGTGGGGATTTTACCCCTCATGTTTTTACTGTTCATACCGGAGAGGATGTTGCAGGAAAAATTCTTTCATTTGCCCAGAACGGTCCCAGAGGAATATGCATTCTTTCTGCCAATGGGGCTATCTCTAATGTGACAATGCGCCAACCTGGTTCTTCCGGTGGCTTGTTGACTTACGAGGGTCGATTTGAGATTTTATCTCTGTCTGGGTCATTCACAATGAACGACAACGGTAGTGGCATGGCAAGTCGGACCGGTGGGTTGAGTGTCTCACTGGCTGGACCGGACGGACGGGTCATAGGCGGTGGTGTTGCCGGTTTATTGACAGCTGCTAGCCCAATCCAGATTGTGATGGGAAGCTTCATGTCAAATGGTTATTTCCATAAGAAACATAAAAAGAAGCAGAACCGAGAACATACAGTTGCTTCTCCTCCTGATTCAGGGATGGCAGCTAGGGCTGTGTCACAAGAAAATCCCAATGGTGAAGCCTGTTTGAAACCAACGTCCCAGATACCAGAAGAACAGGGCCCGATAGAATCTGAGGATGTCACTAACGGTAAACAGAACTTAGATGTGCATTTGAACGGTTCTCAACATTTTTCGGATCAAAGGCCATACCCGGACATCAACATATCTCTGCCTGGCCAATAG 966 0.4928 MEESVSASTPQPLRTSLPQATNNSAGAIVVAEPVTTPASGGGQGSFDLLGKKKRGRPRKYDSEGNLTTSYQKHQAASAFPFSSKKARPKPLPHIFASFGGFFASTAGGDFTPHVFTVHTGEDVAGKILSFAQNGPRGICILSANGAISNVTMRQPGSSGGLLTYEGRFEILSLSGSFTMNDNGSGMASRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMSNGYFHKKHKKKQNREHTVASPPDSGMAARAVSQENPNGEACLKPTSQIPEEQGPIESEDVTNGKQNLDVHLNGSQHFSDQRPYPDINISLPGQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1119 321 MobiDBLite consensus disorder prediction 1 29 - -
Lele05g1119 321 MobiDBLite consensus disorder prediction 286 310 - -
Lele05g1119 321 Pfam Plants and Prokaryotes Conserved (PCC) domain 112 226 IPR005175 -
Lele05g1119 321 MobiDBLite consensus disorder prediction 1 67 - -
Lele05g1119 321 MobiDBLite consensus disorder prediction 234 321 - -
Lele05g1119 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 23 279 IPR039605 GO:0003680
Lele05g1119 321 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 236 - -
Lele05g1119 321 Gene3D - 112 247 - -
Lele05g1119 321 CDD DUF296 111 226 IPR005175 -
Lele05g1119 321 ProSiteProfiles PPC domain profile profile. 107 253 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1119 Lele-ChrLele05 6991360 6992822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1119 49 254 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 51.754 3.47e-68 215