Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1108 ATGGAAATGCCCGGTAGAAGATCCAACTACACACTGTTGAGCCAAATTCCTGACGATCACTACGGCGGCGGAGCCGTGTCGTCTGGGACAGCTGCTACCTCTTCGTTGTTTGGTTCTTCATCTGGGGACGGAAAGAACATTAAAGGAAAATTGGACAGAGGATTTGATTGGGACTTGAGTGCTGATCATAGAGTGACTCAGCAGGGTAACCGGCTCGGAAATTTGTTTCCATCTATCGGGTTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGCGAAAGCTCGTTATCAGGGGAGTATTATGCTCCGACTCCATCTACTGCAGCTGCCAATGAGATCGATGGCTTTGGGTATATGCAAGATGATGGAGTCAGGATTGGTGGAGGGCTTGGTGTTGCGGCCGACTTAAGACCGAGGTTGACGGAAACTGCGGTGCGAACAGCAGGGTCGTCTTCAGGAAAAAGTTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCTAGCTTTGGCGCTTCGGCTTTCATCTGATGCAACCTGCGCTGAGGATCCCAATTTTCTGGATCCTGTCCCGGACGAATCTGCTTTAAGGTCGTCATCCTCAAGCTCTCCGGAGGTTATGTCACATAGATTCTGGGTTAATGGCTGCCTATCATACTCCGACAAAATTCCCGATGGCTTTTACTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGCACTGATCTGCAGGAAAATAGTCGAATTCCATCTGTTGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTACTTTTGGTTGATCAGCATAGCGATCCCAGCTTAAAGGAATTGCAAAATAGAGCGCATAGTATTTCTTCCAGCTGTATAACCTCTAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACAGAATGGGGGGTTCAGCATCTGTTGGGGAGGATGACCTTCTTTCTATTTGGAGGGAGTGCAGTAATGATCTTAAAAATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGCAGGCATCGTGCTACTTTATTCAAAGTACTTGCTGACACCATTGATTTACCGTGTCGGATTGCAAAGGGATGTAAATATTGCTCTAGAGACGATGCTTCCTCTTGCCTTGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTAGGAAGCCAGGTTACTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTCCTTCACCCTTTTGCTTTCCAAGACTTAAACCAGCTGAACCTACAATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCTGATTGTCTGTCCCTTGAGTTTGGTTTTGACAATAATTCTGCAGAACAGCTCGATGGGAAGTGCAGGGACAGAAATAACCCTAGGTCAATTTCAAAGGAAAGCAACAGAACAAAAGATCAAGGTTCTGAAGCATTTAATTCATGTAAACCTTCCCAGAACATTGCAGACTCTACCACTTTGGGCAAGGCTCCATTGCCTATAAATCATAACCTACCTGTTGGTCATAGAGATATTATGAAGCCTTTAGTACTTACAAATCCAAATGTGGATGCTATTGAGGGTAGGCGGTTTGTTGATGGAAGCCAACTGGTTCCTAATAAACCGAACATAGAATTAGGCCTTGATATGGAGGATTTGGACATACCATGGAGCGATCTTGTTTTAAAAGAGCGAATAGGATCAGGTTCTTTTGGAACTGTGCATCGTGCTGAGTGGAATGGCTCGGAGGTTGCTGTTAAAATTCTGATGGAACAAGATTTTCACGCTGAACGTTTCAAGGAATTTCTGAGGGAGGTTGCAATAATGAAGAGGTTGAGGCATCCAAACATTGTTTTATTTATGGGGGCAGTCACCCAGCCTCCAAACTTATCAATTGTCACAGAATACTTATCAAGGGGTAGCTTGTACAGACTATTGCATAAACCTGGCGCCAAAGAGATGTTGGGTGAAAGGGTTAGAATCAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAACCCGCCAATTGTTCATAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACTGTTAAGGTCTGTGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTCTCATCAAAGTCGGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTACGTGATGAGCCATCAAATGAGAAGTCAGATGTTTATAGCTTTGGTGTAATCTTGTGGGAGCTTGCAACATTGCAACAGCCCTGGAGTAATTTGAATCCAGCACAGGTTGTGGCGGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACGAGATTTGAATCCTCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGACCTGGAAACGTCCTTCGTTTGAAAGTATCATGGATTCTTTGAGATCATTGATCAAACCCCCTACACCTCAACCTGGTCGTCCACCATTACTTTCCTGA 2547 0.4484 MEMPGRRSNYTLLSQIPDDHYGGGAVSSGTAATSSLFGSSSGDGKNIKGKLDRGFDWDLSADHRVTQQGNRLGNLFPSIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDGFGYMQDDGVRIGGGLGVAADLRPRLTETAVRTAGSSSGKSWAQQTEESYQLQLALALRLSSDATCAEDPNFLDPVPDESALRSSSSSSPEVMSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTMCTDLQENSRIPSVESLKSVDPCADSSLEVLLVDQHSDPSLKELQNRAHSISSSCITSKEVVDQLAKLVCNRMGGSASVGEDDLLSIWRECSNDLKNCLGSVVVPIGSLSVGLCRHRATLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIRKPGYLWEPDSLLNGPSSISFPSPFCFPRLKPAEPTIDFRSLAKQYFSDCLSLEFGFDNNSAEQLDGKCRDRNNPRSISKESNRTKDQGSEAFNSCKPSQNIADSTTLGKAPLPINHNLPVGHRDIMKPLVLTNPNVDAIEGRRFVDGSQLVPNKPNIELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLGERVRISMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVGFKGKRPEIPRDLNPQIAAIIEACWANETWKRPSFESIMDSLRSLIKPPTPQPGRPPLLS 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1108 848 Gene3D Phosphorylase Kinase; domain 1 569 654 - -
Lele05g1108 848 SUPERFAMILY Protein kinase-like (PK-like) 562 829 IPR011009 -
Lele05g1108 848 Pfam Ethylene-responsive protein kinase Le-CTR1 204 408 - -
Lele05g1108 848 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524
Lele05g1108 848 FunFam Serine/threonine-protein kinase CTR1 655 840 - -
Lele05g1108 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Lele05g1108 848 SMART serkin_6 576 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1108 848 MobiDBLite consensus disorder prediction 466 510 - -
Lele05g1108 848 PRINTS Tyrosine kinase catalytic domain signature 691 709 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 PRINTS Tyrosine kinase catalytic domain signature 801 823 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 PRINTS Tyrosine kinase catalytic domain signature 757 779 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 PRINTS Tyrosine kinase catalytic domain signature 650 663 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 PRINTS Tyrosine kinase catalytic domain signature 738 748 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 Pfam Protein tyrosine and serine/threonine kinase 577 830 IPR001245 GO:0004672|GO:0006468
Lele05g1108 848 ProSiteProfiles Protein kinase domain profile. 576 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1108 848 MobiDBLite consensus disorder prediction 466 489 - -
Lele05g1108 848 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 191 833 - -
Lele05g1108 848 MobiDBLite consensus disorder prediction 490 509 - -
Lele05g1108 848 CDD STKc_MAP3K-like 582 830 - -
Lele05g1108 848 FunFam Serine/threonine-protein kinase isoform 1 566 654 - -
Lele05g1108 848 Gene3D Transferase(Phosphotransferase) domain 1 655 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1108 Lele-ChrLele05 6907347 6916005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1108 1 843 MAP Kinase Kinase Kinase AT5G03730 68.028 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele05g1108 PK_Tyr_Ser-Thr 6.7e-70 CL0016