Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1107 ATGAATCCGAACGACGAAGGTCAACCAAATTCTCCGAAGAGGTCGAAGGGTAAAGCTTCGGCTGATACATATTCTTCAGTTCATTTGGAGCAGGAAACATATGGGTTCTCTCCCACGGAATTGAGTTCTGGAGCATTCGGAGATGCCTCAGCTAGTCTCTCAATGGCGGACATTGGCCTTTCTGGCCATCCTCCGTCTTTGTATGATTCTTCTTTAATGGAGTTTAGAGCATTCTCAACCATGAGCCCGACATCTCTGGCTTCCCCTCCTCCTCCTGCTCCTGTTAGTGATGAGAGAGCTCCTTTGGTACCATTAACTATTAAGGAGGAGGCCGCATTAATAGAAACAAGCGGTGAGTTGGAGGACGTTGATGTGCCACAGCCGCTTGATTGTTTACAGGAGAATCCGATTCCGCCATTTCTATGGAAAACTTGCGATCTGGTAGATGATCCATCTCTGGATCCGATCATATCATGGGGCTCGACCGGTGCTAGTTTCGTGGTATGGGACCCTGTGGATTTTGCAAGGATCGTCTTGCCAAGCAATTTCAAGCATAACAATTTCTCCAGTTTTATCCGCCAGCTAAATACTTATGTGGGTATTTGCTTTAACACAGCCTGGAAAGGCTGCTGTGATCTGTATGGTTTCCGCAAGATTGACCCTGATAAGTGGGAGTTTGCGAATGAAGGTTTCAGGCGAGGGAAGAGACATCTATTGAAGAACATACAAAGGCGCAGATCACTGCAATCCCGGCATGCTGGTATTGTGGGGCCATCCGGTGAAGCAGGGAAGTCTGGAGTTGAGGTTGAGATAGAAAGACTGAGAAAGGAGAGAAGTATATTAGCCCAAGATTTGGTTGATTTGCGGCAACAACAGAGAAGAACTGTTCGTCAGGCGGGACAAGTGAACCAGAAGCTTGAGTCTGCAGAGCAGAGACAGAAACAAACGGTTTCTTTCTTGGCGAAGTTATTTCAAAATCCAGCATTTTTATCCCGCCTGAGGCAACAGGAGGAACCGACAGGTATAGGTTCTCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACGAACACGCGACAGGAACATCAGACTCTTTGAATGAAGGGCAGATTGTAAAATACCAACCTGATTGGAGAGACATTACCAACCCTTCAGAAACGCCAGCACTAAATCCAATTTCTACTGAACAGTCTCCTGAGTACCCTTCACGGGATTGGGCAAGAGAACTTGGTTCAGAAGCAGAAAATCCGTGTGTGCATGCGGATGAATTGGCTGCAGCTAGTGAAATGACTGCTCCAGAGATCGTAGGAGAAGAATCGTCAAGCTTACGACTTGAAGATCCTCTTTGGAAAGGAAAAAACGTCACGAGACCAGATCAAGAAGTTATCCCAGAGGATCTGACCGGGGAGGACAGTGTTTCAATGTTTTACCCGCCTGAAACTGAAAGCGTTATTAAACAAGATTTATGGAACCCGGGCTTTAATGTTAGCGGTGCTACTTCTAGCTATGTGAATGAGCTGTGGGACAATCCAATTCCAATCAATTATGAAGCGCCAGAATTTGGAGTGACAGGTGGCATGTCAGACCTCTGGGATATAAGCTATATGCAAGAAACTGGAAATGCAGGTCTCGATGACGATAATTGGCCAACGGATGAGTTCCCTCCAAATGAAACAGAAGGCTGA 1683 0.4641 MNPNDEGQPNSPKRSKGKASADTYSSVHLEQETYGFSPTELSSGAFGDASASLSMADIGLSGHPPSLYDSSLMEFRAFSTMSPTSLASPPPPAPVSDERAPLVPLTIKEEAALIETSGELEDVDVPQPLDCLQENPIPPFLWKTCDLVDDPSLDPIISWGSTGASFVVWDPVDFARIVLPSNFKHNNFSSFIRQLNTYVGICFNTAWKGCCDLYGFRKIDPDKWEFANEGFRRGKRHLLKNIQRRRSLQSRHAGIVGPSGEAGKSGVEVEIERLRKERSILAQDLVDLRQQQRRTVRQAGQVNQKLESAEQRQKQTVSFLAKLFQNPAFLSRLRQQEEPTGIGSPRVRRKFVKQHEHATGTSDSLNEGQIVKYQPDWRDITNPSETPALNPISTEQSPEYPSRDWARELGSEAENPCVHADELAAASEMTAPEIVGEESSSLRLEDPLWKGKNVTRPDQEVIPEDLTGEDSVSMFYPPETESVIKQDLWNPGFNVSGATSSYVNELWDNPIPINYEAPEFGVTGGMSDLWDISYMQETGNAGLDDDNWPTDEFPPNETEG 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1107 560 PRINTS Heat shock factor (HSF) domain signature 178 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1107 560 PRINTS Heat shock factor (HSF) domain signature 140 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1107 560 PRINTS Heat shock factor (HSF) domain signature 191 203 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1107 560 MobiDBLite consensus disorder prediction 538 560 - -
Lele05g1107 560 FunFam Heat stress transcription factor B-4 132 246 - -
Lele05g1107 560 Coils Coil 271 291 - -
Lele05g1107 560 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 126 381 IPR027725 -
Lele05g1107 560 Pfam HSF-type DNA-binding 140 245 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele05g1107 560 MobiDBLite consensus disorder prediction 1 37 - -
Lele05g1107 560 SUPERFAMILY "Winged helix" DNA-binding domain 136 245 IPR036390 -
Lele05g1107 560 MobiDBLite consensus disorder prediction 378 401 - -
Lele05g1107 560 MobiDBLite consensus disorder prediction 379 400 - -
Lele05g1107 560 Gene3D - 132 246 IPR036388 -
Lele05g1107 560 SMART hsfneu3 136 245 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1107 Lele-ChrLele05 6900798 6903336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1107 81 552 HSF AT5G03720 41.548 5.30e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele05g1107 HSF_DNA-bind 3.1e-26 CL0123