Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1098 ATGGTGAATAAGAAGCCAAGAGCCGGAAGGAAGAAGTTCCAAGAGACTCGTCACCCAACATACAAAGGCGTGAGGCAGAGAAACGGCACGTGGGTTTGCCAGCTTCGACAGCCCAACAACAACAAAGCCCGCCTTTGGCTCGGAACCTTTGCTAGCCCTGACATGGCCGCCATAGCCCACAATGTTGCTGCTCTTGCTTTCAAGGGCGATTCTGCGTCCTTGCATTTCCCCGACGCTGCTTCCGCGTTGCCTCTCCTAAATCCGCGGACCTCCTCCCTCAGATCCATCCAGTTCGCAGCCATGGAAGCGGCTGAGAAGCTTCTCTGCGACGACGATGAGTCTGGGAAGAACATGTCAGCTTTGTCTCTGGACTGCAACTTCGAGTGCTCGGAAGCATTAGAAGAAGAAGAGGACGCGGCGGCGAGGAGTATTCATTGGGATGAAGAAGAGGTGTTCAACATGCCTGGACTCATGAAAAGCATGGCAGAAGGGCTGATTATCACACCACCAGCCTTGCAGAGAGGCTTCAATTGGGATGACATCGAAACCACCACCACCGACTTGACACACTGA 573 0.5375 MVNKKPRAGRKKFQETRHPTYKGVRQRNGTWVCQLRQPNNNKARLWLGTFASPDMAAIAHNVAALAFKGDSASLHFPDAASALPLLNPRTSSLRSIQFAAMEAAEKLLCDDDESGKNMSALSLDCNFECSEALEEEEDAAARSIHWDEEEVFNMPGLMKSMAEGLIITPPALQRGFNWDDIETTTTDLTH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1098 190 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 4 182 IPR045277 GO:0003700
Lele05g1098 190 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Lele05g1098 190 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Lele05g1098 190 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Lele05g1098 190 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Lele05g1098 190 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Lele05g1098 190 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1098 Lele-ChrLele05 6834986 6835558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1098 4 179 AP2-EREBP Transcription Factor Family AT4G25470 46.667 4.08e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g1098 AP2 3.9e-08 CL0081