Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1097 ATGGCTCGCCAGTTACAGGAGCTACTCAAAGAACATCAAGAACCGTTCCTATTAAACGAGTACATTTCAGGTAGGCGGACTCAGCTGATGACCAGGCCTTCCCCCAGCACCACTATGCAACTCAAGAAACCAAAAACAATCCATCATCACAACTCAAGCTTTCCCCCTGGTTTATTAAACTCGCCATTCTTGGAATTCGCATCTCCGGCCAAGAGCCCCTGTAAGTCCCCCAATGCCATCTCCCTCCATATCCCTTCTCAAATAGCCGCGCTCCTTCTCGAAGCTGCTCTCCGAATTCAGAAACACTCCTCGTCTTCCAAATCTAAAGCCCAAAATAAGACCAATGGGTTTGGTTTATTCAGGTCATTGTTCAAGAGACTAACGCCGAGAAACCGAAATAGGGAAATACGGGATGGGAGCGGTGACGTAGGCAAGAAAAATCAAGAACAAATGGTATCTACTGATCAGTTGGGCTTTCCATGTTCTTACAATGGACGTCCCAGCAGTGCTGTGTGGTCTGAGACCAATGAGGATAAATCTTTGGACATGGAAACGTGCAGCAGTACTAGCTACTCCGATGAATCCCACGAGATCGACCTTGTTTCCAAATCCAACCAGGAACACGTTACGGATTGTGTTTGCTGTGATCACGACTTCTGCGAAAGCCCTTTTCGCTTTGCATTACGGATTAGCCCCTCTTCTGGCCACCAGACGCCGGAATTAATGTCACCGAGTGGCCCCAGAGAAGAGGAGAAAGAAAGGAATGGAACGGAGAGTGTTGAGAAATTACAATTAAGGGAGGAAGAGGAAGAAGAGAAGGAGCAATTCAGCCCGGTGTCTGTTTTAGACCCATCCTTCGATAACGACGACAAAGGGCATGAAAACAACGATGAGGACGTCGGTTTTGATTTGGAGTGCAGCTATGCCATTTTACGGAGAGCAAAGCACCAACTATTGTACAAGCTTCGTAGTTTTGAGAAACTTGCGGGATTGGATCCGATTGAACTTGAGAAAATCATGTTAGAAGAAGGAGATGAAGACGATGAGGCATCCGATGAAGAGGGCTTTAACAGGTTAGTCTTAGAAGTCATCTGCCAATCTAGCATCCATGAGAGTCAAGAAATACCAGAAGACCACAGGAGACTGATTTCAGATCTCGTTCTGGAGGAAGAAAGAGAACTAAATTCCTCGGAGGGGAGGGAAATGGTGATAAGAAGGGTTTGCAAGAAGCTGGAATCGTGGGGAGAAGTGGAACCTAAAACGATCGATATGGTGATAGAACAGGACTTTTGTAAAGAGGATGATGGATGGAAGAAAAATGAAGGGCACAAGAAAGAGGTGGCAGGGGAGCTTGAGCAATCTATTTTTGGGCTTCTAGTAGAAGAATTTTCGGAGGAGCTAGTATGTTGA 1410 0.461 MARQLQELLKEHQEPFLLNEYISGRRTQLMTRPSPSTTMQLKKPKTIHHHNSSFPPGLLNSPFLEFASPAKSPCKSPNAISLHIPSQIAALLLEAALRIQKHSSSSKSKAQNKTNGFGLFRSLFKRLTPRNRNREIRDGSGDVGKKNQEQMVSTDQLGFPCSYNGRPSSAVWSETNEDKSLDMETCSSTSYSDESHEIDLVSKSNQEHVTDCVCCDHDFCESPFRFALRISPSSGHQTPELMSPSGPREEEKERNGTESVEKLQLREEEEEEKEQFSPVSVLDPSFDNDDKGHENNDEDVGFDLECSYAILRRAKHQLLYKLRSFEKLAGLDPIELEKIMLEEGDEDDEASDEEGFNRLVLEVICQSSIHESQEIPEDHRRLISDLVLEEERELNSSEGREMVIRRVCKKLESWGEVEPKTIDMVIEQDFCKEDDGWKKNEGHKKEVAGELEQSIFGLLVEEFSEELVC 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1097 469 PANTHER OS04G0572500 PROTEIN 1 467 - -
Lele05g1097 469 MobiDBLite consensus disorder prediction 30 49 - -
Lele05g1097 469 MobiDBLite consensus disorder prediction 245 277 - -
Lele05g1097 469 MobiDBLite consensus disorder prediction 231 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1097 Lele-ChrLele05 6829513 6832109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1097 3 468 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.333 4.28e-42 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2051 13 27640019 27653630 Lele05g1097 05 6829513 6832109 CCT
Lele15g0355 15 2028189 2029552 Lele05g1097 05 6829513 6832109 CCT
Lele05g1097 05 6829513 6832109 Lele05g1097 05 6829513 6832109 ECH
Lele05g1097 05 6829513 6832109 Lele07g1138 07 6866777 6869424 hybridization
Lele05g1097 05 6829513 6832109 Lele08g0949 08 5988807 5991839 hybridization