Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1075 ATGGTTGTGGCAGAAGGGGAAGTGGACTCATTATTGCAGACAGAACAAACATCAAAAAACCAAACAATGTCATCTCTGGGAAGGCAATCTTCAATATATGCTCTCACACTTGACGAGTTCCAACACAAGCTATGCGAAGAAGGCAAGAATTTCGGGTCCATGAACATGGATGAGTTTCTCAGTAGTATATGGAACGTGGAAGAAAACCAAACCATCAACAACAGCAGCAGCAGCAACAACAACTCTGATGATAAAGGCACAAGAAAGCAACCAAGCTTGTCTCGCCAGGGATCTCTCACCATTCCTACTCCGCTCTCCAGAAAAACAGTGGACCAAGTTTGGTCTGAGATACACAACCAAGGTACCGACAACAACAACAATGGCGATGCGGGAAACAATGTTCGGAATTCCAAGTCTGCCGCACACCAGCCCACTTACGGGGAGATGACTCTGGAGGATTTCTTGATCAAAGCAGGGGTAGTTCGGGAAGCATGTCCTGTGCGTGCTCAATACGGGCTGTACCCGAATAACAAACCGGCAATGGGGCCCACTTTCATTGGATACGCCGGAAATGGCAAGAGGGATGCTTCTGGGTATCCTCCTCCGGGGGTTTGCTACGGAGGAAGCGGTGGGTACGGAGCTGCGGCGCCGGTGAGTCCTGTGTCATCATCAGATGGGATGGTAGCGAGGGAGAAGGCCGGCGGAGGACAGTACGGTATGGAGATAGGAGTGCTGAGAGGAAGAAAGAGTATAATAGATGGGCCGGTGGAGAAGTTAGTGGAGAGAAGACAGAGAAGGATGATCAAGAACAGAGAATCAGCAGCGAGGTCCAGAGCCAGAAAACAGGCATACACCGTTGAATTGGAAGCAGAACTGAGCCAGTTAAGAAGAGAGAATGCCCAGCTGAAACTTACTCTGGTGGAGCTTGAGAGGAGAAGGAAGCGACAGTGTTTGGAGGAATTAAAGAATAGTGACTCTAGCGTTAAGAGCAAAGGTCAAAAAGCAGGAGACAATTTGAGAGCTCTGAGAAGGAACCAGAGTTGTTATTTGTGA 1053 0.4881 MVVAEGEVDSLLQTEQTSKNQTMSSLGRQSSIYALTLDEFQHKLCEEGKNFGSMNMDEFLSSIWNVEENQTINNSSSSNNNSDDKGTRKQPSLSRQGSLTIPTPLSRKTVDQVWSEIHNQGTDNNNNGDAGNNVRNSKSAAHQPTYGEMTLEDFLIKAGVVREACPVRAQYGLYPNNKPAMGPTFIGYAGNGKRDASGYPPPGVCYGGSGGYGAAAPVSPVSSSDGMVAREKAGGGQYGMEIGVLRGRKSIIDGPVEKLVERRQRRMIKNRESAARSRARKQAYTVELEAELSQLRRENAQLKLTLVELERRRKRQCLEELKNSDSSVKSKGQKAGDNLRALRRNQSCYL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1075 350 MobiDBLite consensus disorder prediction 10 25 - -
Lele05g1075 350 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 314 IPR043452 GO:0003700|GO:0045893
Lele05g1075 350 SMART brlzneu 258 320 IPR004827 GO:0003700|GO:0006355
Lele05g1075 350 MobiDBLite consensus disorder prediction 1 25 - -
Lele05g1075 350 Gene3D - 260 311 - -
Lele05g1075 350 SUPERFAMILY Leucine zipper domain 262 309 IPR046347 GO:0003700|GO:0006355
Lele05g1075 350 MobiDBLite consensus disorder prediction 71 143 - -
Lele05g1075 350 CDD bZIP_plant_BZIP46 262 309 - -
Lele05g1075 350 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 260 312 IPR004827 GO:0003700|GO:0006355
Lele05g1075 350 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 265 280 IPR004827 GO:0003700|GO:0006355
Lele05g1075 350 Coils Coil 278 319 - -
Lele05g1075 350 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 260 308 - -
Lele05g1075 350 Pfam bZIP transcription factor 262 312 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1075 Lele-ChrLele05 6662361 6663683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1075 19 317 bZIP Transcription Factor Family AT2G36270 48.958 1.61e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele05g1075 bZIP_1 3.1e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1075 05 6662361 6663683 Lele13g1662 13 25375687 25378127 CCT
Lele05g1075 05 6662361 6663683 Lele14g1604 14 23766770 23768610 CCT
Lele05g1075 05 6662361 6663683 Lele15g0753 15 4344651 4346404 CCT
Lele05g1075 05 6662361 6663683 Lele16g0760 16 4286255 4288086 CCT
Lele05g1075 05 6662361 6663683 Lele05g1075 05 6662361 6663683 ECH
Lele05g1075 05 6662361 6663683 Lele07g1111 07 6695689 6697745 hybridization
Lele05g1075 05 6662361 6663683 Lele08g0923 08 5805676 5810602 hybridization