Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1047 ATGCGTTTTTCTAAAGTGCCAAGCGATTCCTTTTCACGGCTTTGGCAAGCTCAGCGGAGGATTCTCCATCTTAGCAAAATGTGGGCAAGCGCAGAAGGCGGTGCTCCGGAGGTCACTTTAGAGACTTCCATGGGTTCTTTCACCGTTGAGCTGTACTACAAGCATGCCCCCAGAACCTGCAGAAACTTCATGGAACTATCTCGCAGAGGCTATTACGATAACGTTAAATTCCACAGAATCATCAAGGACTTCATAGTACAAGGTGGAGATCCCTCTGGAACAGGAAGGGGAGGAGAATCCATTTATGGTCCAAAATTTGAAGATGAGATAAAACAGGAGTTGAAGCACACCGGAGCTGGTATCTTATCCATGGCAAACGCTGGCCCAAATACTAATGGTAGTCAGTTCTTCATTACTTTGGCGCCATGCCCATCTTTGGATGGTAAACACACCATATTTGGAAGAGTTTGTCGAGGGATGGAAATTATCAAGAGACTTGGCAGGGTTCAAACTGATAACAATGATAGGCCCATCCATGATGTGAAGATACTAAGGACATCGGTCAAGGATTGA 573 0.4555 MRFSKVPSDSFSRLWQAQRRILHLSKMWASAEGGAPEVTLETSMGSFTVELYYKHAPRTCRNFMELSRRGYYDNVKFHRIIKDFIVQGGDPSGTGRGGESIYGPKFEDEIKQELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTIFGRVCRGMEIIKRLGRVQTDNNDRPIHDVKILRTSVKD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1047 190 SUPERFAMILY Cyclophilin-like 37 188 IPR029000 -
Lele05g1047 190 FunFam Peptidyl-prolyl cis-trans isomerase 28 190 - -
Lele05g1047 190 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 35 188 IPR044666 -
Lele05g1047 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 89 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 147 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 66 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 41 188 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 38 187 IPR002130 GO:0000413|GO:0003755
Lele05g1047 190 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 72 89 IPR020892 GO:0003755|GO:0006457
Lele05g1047 190 Gene3D - 20 190 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1047 Lele-ChrLele05 6503146 6505777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1047 38 188 U-box Gene Family AT5G67530 48.344 3.61e-49 166