Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele05g1043 | ATGGCAGTGATCGCAAGATTCATTGGCATCCGTTCTGCTTTGCCTCGCTCCTCACTTGTTTCTCCTGCTCTCCTCAGTAGAGGAATTGCTTACAAGCTCTTCGTTGGAGGACTGTCATTTCTCACAACGGATAAGGGATTGTCAGAAGCATTTTCTGGGTATGGTCAAGTTGTTGAAGCAAAAATTGTCATGGACAAGGTATCAGACAGATCAAAAGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGATAATGCTATAACAGGGATGAATGGGAAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAATCCAATATTGGTTATGGAATGCCAATTGCTAGAGGACCTCCTGAACCAACAGCGCACAGTTAA | 393 | 0.4453 | MAVIARFIGIRSALPRSSLVSPALLSRGIAYKLFVGGLSFLTTDKGLSEAFSGYGQVVEAKIVMDKVSDRSKGFGFVTFASEDEADNAITGMNGKALNGRVIFVDYAKPKSNIGYGMPIARGPPEPTAHS | 130 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele05g1043 | 130 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 33 | 102 | IPR000504 | GO:0003723 | |
Lele05g1043 | 130 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 31 | 109 | IPR000504 | GO:0003723 | |
Lele05g1043 | 130 | SMART | rrm1_1 | 32 | 105 | IPR000504 | GO:0003723 | |
Lele05g1043 | 130 | SUPERFAMILY | RNA-binding domain, RBD | 31 | 122 | IPR035979 | GO:0003676 | |
Lele05g1043 | 130 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 28 | 116 | - | - | |
Lele05g1043 | 130 | Gene3D | - | 22 | 113 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele05g1043 | Lele-ChrLele05 | 6483759 | 6485752 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele05g1043 | 33 | 111 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 36.709 | 1.49e-09 | 52.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele05g1043 | 05 | 6483759 | 6485752 | Lele05g1043 | 05 | 6483759 | 6485752 | ECH | |
Lele05g1043 | 05 | 6483759 | 6485752 | Lele07g1078 | 07 | 6513371 | 6515442 | hybridization | |
Lele05g1043 | 05 | 6483759 | 6485752 | Lele08g0891 | 08 | 5631554 | 5632785 | hybridization |