Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1031 ATGAGGTCATCTTCGTCCTGGCCTTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACACCGCCGACTCGGATTCCACAGCAGTGGAAGTCGACCCGGTAGAGACCTTGGTTCGCGGGTTGCGGTCGGACCCGAGGCGGCTGTTTTACGAGCCAGATGAGACTAGCTCCATATTGGAGAAAAAAGCTTATGCAGGAGGAGGACGCGTGCCATTCAAAGACAGCTTCGTGCTATCCATGGAGTCTCGAGACCCTTACGAAGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCACGCCCTCAAGCACTTGGAGGCTCTTCAGGAGCTTCTGTGTTGGTATTTGAGGGTCAATGCCAAAAGCAATCACGTCTGTATTCTCGCTGCTTTTGTAGATTTATTGGTTGGGCTTTCTCCTTCTTCTCCTTCTCCCTGCCCTTCTTCTCATTTATCTTTTTCTACTGCGTCTATGTCTTCCTCCTTTAGTACACGTTGTGTTAATGATTCTTCCTTAGAAGCCGAGGAAGAGGTCGATGCAACTGATCAGGCTTCAACTTCGGCTTCGTCTTGGTCACAAAAAGTTAAGGAGGAGGATATTGACCCTCATGATGACGAGGCTTCTTCTTTGAATGCTGGATTAGAGCGCAGAATAATGAAGGTGGTCCTTATTTCTGAGGCTCGTGATGATGATCATATAGTCTGCAGCAAGAGGCATTGCATATGTGGGTTTATTGCTGCTTCCAATACAAATGAATTGGATTGGTCATGTTTGCTTTTTGTTGGGAATCCAACATTGTCTGTATATGCCTCAATCATGTACAGCACAGCAATGTGGTAA 849 0.477 MRSSSSWPWPSCHQPRTLSFRANTADSDSTAVEVDPVETLVRGLRSDPRRLFYEPDETSSILEKKAYAGGGRVPFKDSFVLSMESRDPYEDFRKSMEEMVEAHALKHLEALQELLCWYLRVNAKSNHVCILAAFVDLLVGLSPSSPSPCPSSHLSFSTASMSSSFSTRCVNDSSLEAEEEVDATDQASTSASSWSQKVKEEDIDPHDDEASSLNAGLERRIMKVVLISEARDDDHIVCSKRHCICGFIAASNTNELDWSCLLFVGNPTLSVYASIMYSTAMW 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1031 282 ProSiteProfiles OVATE domain profile. 81 140 IPR006458 -
Lele05g1031 282 Pfam Transcriptional repressor, ovate 85 141 IPR006458 -
Lele05g1031 282 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 81 142 IPR006458 -
Lele05g1031 282 MobiDBLite consensus disorder prediction 176 210 - -
Lele05g1031 282 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 44 142 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1031 Lele-ChrLele05 6406548 6408196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele05g1031 Ovate 1.6e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1031 05 6406548 6408196 Lele13g1629 13 25193823 25194512 CCT
Lele05g1031 05 6406548 6408196 Lele14g1563 14 23567115 23567804 CCT
Lele05g1031 05 6406548 6408196 Lele15g0787 15 4525468 4526148 CCT
Lele05g1031 05 6406548 6408196 Lele16g0800 16 4489325 4489828 CCT
Lele14g1552 14 23498796 23499443 Lele05g1031 05 6406548 6408196 CCT
Lele15g0797 15 4604163 4604798 Lele05g1031 05 6406548 6408196 CCT
Lele16g0815 16 4564783 4565430 Lele05g1031 05 6406548 6408196 CCT
Lele05g1031 05 6406548 6408196 Lele05g1031 05 6406548 6408196 ECH
Lele05g1031 05 6406548 6408196 Lele07g1070 07 6455141 6455827 hybridization
Lele05g1031 05 6406548 6408196 Lele08g0882 08 5571633 5572331 hybridization