Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1023 ATGCCTGCAAAACAATCCCAACTGAACGGGGCCTACTATGGCCCATCCATCCCGCCACCCACCTCCTACCACCGACCAGGCCGCGGCTCTGGCGGCTGCTTTGGGCTTTTCTCCTGTATCTTCAATCTTCTTATCACCATCATCATCATCGTCGGCGTCGCTGTTTTCTTGTTCTGGCTCATCGTCCGTCCCAGCGTTGTCAAATTCCACGTCACCGATGCCTCCCTCACTCAATTCAACTTCACCTCTAACAACACCCTCCTTTACGACCTGGCCCTGAACATCACCGTCCGAAACCCCAACCGCAAGCTAGGGCTCTATTACGACAAAATCAAAGCCTCTGCATCGTATCAGGATGCGTGGTTCGATTCTCAGACCCTGAAGCCCTTCTATCAGGGCCACAAGACTACGGATTTTTTGAACCCTGTCTTTGTGGGTCAACGCTCCTTGCTCCTTGACTCCACACAGACTTCGGAGTTGAACAAGGACCAGAGCTCTGGGATTTATAATATCGACGTCACTCTGCGTCTGAAGCTAAGGTTCAAGTTAGGAGCCTTGAAGACCTTCAAGTTGAAGCCCAAGGTTAAATGTGACTTGTCCGTTCCTCTCACCGGTACACCTGATAGAAATTCAACCGCCGGTGAGTTTCAGACCACGCGGTGCGACCTCGATTATTGA 678 0.5162 MPAKQSQLNGAYYGPSIPPPTSYHRPGRGSGGCFGLFSCIFNLLITIIIIVGVAVFLFWLIVRPSVVKFHVTDASLTQFNFTSNNTLLYDLALNITVRNPNRKLGLYYDKIKASASYQDAWFDSQTLKPFYQGHKTTDFLNPVFVGQRSLLLDSTQTSELNKDQSSGIYNIDVTLRLKLRFKLGALKTFKLKPKVKCDLSVPLTGTPDRNSTAGEFQTTRCDLDY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1023 225 PANTHER OS05G0367900 PROTEIN 38 202 IPR044839 GO:0098542
Lele05g1023 225 Pfam Late embryogenesis abundant protein 94 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1023 Lele-ChrLele05 6348208 6348885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1023 61 214 SNARE and Associated Proteins AT1G32270 38.312 4.25e-30 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1023 05 6348208 6348885 Lele05g1023 05 6348208 6348885 ECH
Lele05g1023 05 6348208 6348885 Lele07g1061 07 6401452 6402135 hybridization
Lele05g1023 05 6348208 6348885 Lele08g0872 08 5508661 5509344 hybridization