Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1013 ATGGAGGAGCGTTTCCTGAAGCTTGTTTCAGCACTCATTCTCTCTCTTGCTGTAGTGGGTTTTAGTGCCACTGATCCGAATGACGTGAAGATTCTCAACCAATTCAGGAAAGGCTTGGACAATCCGGAGCTTCTGCCGTGGCCTGAAGATGGTGGAGACCCATGCGGGAGCCCTCCTTGGAAGTACATCTTCTGCAAGGGAAATAGAGTTTCCCAGATTCAGGCTAAGAACTTGAACTTGAGTGGTCCTCTGCCTCAGAATTTCAACCAGCTCTCCATGCTAGAAAACATTGGCCTTCAGAACAACAAACTCAACGGGCCGTTACCGTCTTTCAGTGGGTTATCCAATTTGAGATATGCATACTTGGACTACAATGACTTTGATTCCATTCCCGCTGATTTCTTTGATGGGCTCGTGAGTCTGGAAGCTCTGGCATTGGATGATAATAATTTTAATGCCAGCACTGGATGGCAATTCCCCACTCTGTTGCAAGATTCATCACAGTTAACCAACCTTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCGAGTTTTCTGGGGAATTTGTCTTCTTTGTCTATCCTGAAGCTTTCACGCAACAATTTAACTGGTGAAATTCCGGCGACTTTAAGTGGCTCGATTTTGCAGGTTCTATGGTTGAACGATCAGCTGGACGGCGGTCTTACTGGTTCTATTGATGTGGTGGCAACCATGACTTCCCTTACGAGTGTGTGGCTTCATGGAAATCACTTCACGGGGACGATTCCTAAGAACATTGGGGATTTAACTTCTCTCAAGGATCTCGATCTCAATTATAACCAGCTCGTTGGCCTAATCCCAGATGCTTTGGGTAAAATGAAACTCGACAGCCTTAATTTGAACAACAACCACCTAAAGGGACCGATCCCAAATTTCGCGGCCGGCAAAGTTTCGTACGATTATAATTATTTTTGTCAACCCAAACCTGGCGCTCCTTGTGCCTTTGAAGTCATGGCACTCCTGGACTTTCTGGATGGATTGAATTATCCTTTAAATCTAGTTGAATCTTGGTCCGGTAATGACCCATGTAAAGGCCCATGGCTGGGACTAAAATGCGATGACTCTGGAAAGTTGTCAATGATTAATTTGCCCCAATTTAAGCTCAATGGTGCTCTGAGCCCCTCTCTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGGGGGCAACAATCTGAGTGGTCAAATACCTAGTAATTGGACTAGCTTGAGTTCTCTGACTCTGTTGGATCTCAGTAACAATAACATTTCCCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTCGTCGATACTGGCAACTCTTTATTGAATGGGAACCCAGGGGCCCCTTCATCTGGGAACAGCTCATCTTCTGGGAATTCTATTCCTTCAATTGATACTCCATCCTCGTCAACACGCACAAATCCCAGTCTCAACACTACTCCTGGATCACAAACTTCCACCAGGAAAATTTTGGTTGCAATTGTAGCCCCTGTTGCAGGTGTTGCGGCAGCAGCTTTTCTGCTCATTCCCCTGATATCTTGTTACAAGAGGAGAAAAGATAGCTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGACAATATGGTAAAGATTGCGGTAGCTAACAATACCTATGGAAGTACGTCCACGTCCACGTTAACAGGGAGTGGGTCAGCAAGTAGAAACAGCAGTGGAACCGGGGAGTCTCATGTCATTGAAGGTGGAAATCTTGTGGTATCAGTTCAAGTTCTTCGAAATGTGACTAAGAATTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTTGTATATAAGGGAGAATTGGATGACGGGACTAAAATAGCTGTAAAAAGAATGGAAGCTGGTATAATTAGTAACAAAGCGTTGGATGAATTTCAGTCTGAAATTGCAGTTCTGTCAAAAGTTAGACACCGTCATCTAGTGTCTCTCCTGGGTTACTCTGTTGAAGGTAATGAGAGAATTCTAGTTTATGAGTATATGTCTCAAGGGGCTCTCAGCAAACATCTTTTTCAATGGAAGAGCCTTAAGTTGGAACCACTTTCTTGGAAAAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTCCATAGCCTCGCTCATCAGAGCTTCATTCACAGAGATCTTAAGCCCTCCAATATTTTGCTTGGGAATGATTTTAGAGCCAAAGTCTCTGACTTTGGATTGGTTAAACTTGCTCCTGATGGTGAAAAATCTGTCGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACGGGAAAAATCACAACCAAAGCAGACGTCTTTAGTTTTGGAGTTGTGTTAATGGAGTTGTTGACTGGATTGATGGCACTTGATGAGGATAGGCCTGAGGAAAGCCAATACTTGCCAGCATGGTTCTGGCACATAAAATCTGATAAGGAGAAACTTATGGCTGCTATTGATCCCTCCCTTGACAAAAAAGAAGAAACTTTTGAGAGCATTACGGTCATTGCCGAGCTAGCTGGTCACTGTACTGCAAGAGAACCAGGCCAGCGACCAGATATGGGCCATGCTGTAAATGTTCTGGCTCCACTCGTTGAACAATGGAAACCCTTTGATGATGACACTGAGGAGTATTCGGGAATTGATTATAGTCTTCCCCTTAATCAGATGGTGAAGGGTTGGCAAGAGGCAGAAGGAAAGGACTCGAGTTACATGGACCTAGAAGACACTAAGGGTAGTATCCCCGCAAGGCCAACTGGATTTGCAGATTCTTTTACTTCTGCTGATGGTCGCTAA 2859 0.4474 MEERFLKLVSALILSLAVVGFSATDPNDVKILNQFRKGLDNPELLPWPEDGGDPCGSPPWKYIFCKGNRVSQIQAKNLNLSGPLPQNFNQLSMLENIGLQNNKLNGPLPSFSGLSNLRYAYLDYNDFDSIPADFFDGLVSLEALALDDNNFNASTGWQFPTLLQDSSQLTNLSCMSCNLAGPLPSFLGNLSSLSILKLSRNNLTGEIPATLSGSILQVLWLNDQLDGGLTGSIDVVATMTSLTSVWLHGNHFTGTIPKNIGDLTSLKDLDLNYNQLVGLIPDALGKMKLDSLNLNNNHLKGPIPNFAAGKVSYDYNYFCQPKPGAPCAFEVMALLDFLDGLNYPLNLVESWSGNDPCKGPWLGLKCDDSGKLSMINLPQFKLNGALSPSLANLGSLVEIRLGGNNLSGQIPSNWTSLSSLTLLDLSNNNISPPLPHFSSKLKLVDTGNSLLNGNPGAPSSGNSSSSGNSIPSIDTPSSSTRTNPSLNTTPGSQTSTRKILVAIVAPVAGVAAAAFLLIPLISCYKRRKDSSLAPSSLVIHPRDPSDSDNMVKIAVANNTYGSTSTSTLTGSGSASRNSSGTGESHVIEGGNLVVSVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGIISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHLFQWKSLKLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGNDFRAKVSDFGLVKLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLPAWFWHIKSDKEKLMAAIDPSLDKKEETFESITVIAELAGHCTAREPGQRPDMGHAVNVLAPLVEQWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDSSYMDLEDTKGSIPARPTGFADSFTSADGR 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1013 952 Gene3D Phosphorylase Kinase; domain 1 568 683 - -
Lele05g1013 952 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
Lele05g1013 952 MobiDBLite consensus disorder prediction 563 583 - -
Lele05g1013 952 SUPERFAMILY L domain-like 23 306 - -
Lele05g1013 952 MobiDBLite consensus disorder prediction 449 493 - -
Lele05g1013 952 Gene3D Transferase(Phosphotransferase) domain 1 684 902 - -
Lele05g1013 952 FunFam receptor protein kinase TMK1 684 901 - -
Lele05g1013 952 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Lele05g1013 952 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Lele05g1013 952 Pfam Protein tyrosine and serine/threonine kinase 609 880 IPR001245 GO:0004672|GO:0006468
Lele05g1013 952 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Lele05g1013 952 SMART LRR_typ_2 417 441 IPR003591 -
Lele05g1013 952 SMART LRR_typ_2 190 214 IPR003591 -
Lele05g1013 952 SMART LRR_typ_2 239 262 IPR003591 -
Lele05g1013 952 SMART LRR_typ_2 114 137 IPR003591 -
Lele05g1013 952 SMART LRR_typ_2 263 286 IPR003591 -
Lele05g1013 952 SMART LRR_typ_2 393 416 IPR003591 -
Lele05g1013 952 Gene3D Ribonuclease Inhibitor 25 323 IPR032675 -
Lele05g1013 952 CDD STKc_IRAK 612 885 - -
Lele05g1013 952 FunFam receptor protein kinase TMK1 568 683 - -
Lele05g1013 952 PANTHER OSJNBA0070M12.3 PROTEIN 11 952 - -
Lele05g1013 952 SUPERFAMILY L domain-like 330 442 - -
Lele05g1013 952 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Lele05g1013 952 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lele05g1013 952 SMART serkin_6 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1013 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Lele05g1013 952 SUPERFAMILY Protein kinase-like (PK-like) 581 882 IPR011009 -
Lele05g1013 952 FunFam Receptor-like kinase TMK4 26 324 - -
Lele05g1013 952 ProSiteProfiles Protein kinase domain profile. 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1013 952 MobiDBLite consensus disorder prediction 919 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1013 Lele-ChrLele05 6283877 6287126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1013 75 887 Receptor kinase-like Gene Family AT5G07280 32.765 1.75e-83 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele05g1013 PK_Tyr_Ser-Thr 1.3e-46 CL0016