Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1007 ATGATGGAGAGAGGGTGGAAGCATAATAATACTGAGATATCACCTAATTGTCCAAGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGTAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCTGTCGGCGGTGGCTGCCGGAAAACCAGGCGCCATACTAGTAAGACCTTAAGAGTACACTCAGCCTTGCCTAATGCCTATCCCTCGACTTTTTCATCTTCTAGCTCCCCATTACCGCCGGCGTCTGATCATGCTCCACATATTGATCTTGCGCTGATTTATGCCAATTTTGTCAATCAAAACACTGGTTCAAGCTATCAGGAACCAGATCATCATCATCAATTCATGAAAACATTAGGTTTTGATCCTTGCGTAGAGTATTCGAGTCTGTTCGACGTAGTTTTTGGTCTTTATGAACCATCCTCAATAATAGAATCCCATTTCAATGTTGTTGGTGGCCATCGTCATCTGGATGGGTTATTCAACTCCATGCAAGAGCATCATAAGGAAGACAGAATAATTGGTAGTAGCGATTTTGAGCTGCCGCCATTACCAGGTGAAGAGTTGGCCTCGCAATATGATATGATGTGGTCCTCCGAAGAATCTCATCATGACAAGATGATGGTCGTAAACCAGGCGCCACTTGGAACTCAAGCTCATCATGTCAATAGTAACTGGGGACCCTTTCATTAG 747 0.4471 MMERGWKHNNTEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHTSKTLRVHSALPNAYPSTFSSSSSPLPPASDHAPHIDLALIYANFVNQNTGSSYQEPDHHHQFMKTLGFDPCVEYSSLFDVVFGLYEPSSIIESHFNVVGGHRHLDGLFNSMQEHHKEDRIIGSSDFELPPLPGEELASQYDMMWSSEESHHDKMMVVNQAPLGTQAHHVNSNWGPFH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1007 248 ProSiteProfiles Zinc finger Dof-type profile. 15 69 IPR003851 GO:0003677|GO:0006355
Lele05g1007 248 ProSitePatterns Zinc finger Dof-type signature. 17 53 IPR003851 GO:0003677|GO:0006355
Lele05g1007 248 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 159 IPR045174 GO:0003700|GO:0006355
Lele05g1007 248 Pfam Dof domain, zinc finger 16 69 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1007 Lele-ChrLele05 6223501 6224247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1007 6 216 C2C2-Dof Transcription Factor Family AT3G52440 43.519 5.86e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele05g1007 zf-Dof 1.4e-30 No_clan