Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0999 ATGCATGTTTTGTTCTTCAAATCCTTCCTCTGTTTAACACAGCCTGGTCTTGTAAATAAAGCAGCGAATCCAAATGTGCATTTTGGCAGCCCATTGCGTGGAATTCGTTTTCTCAGAGGAGGCATGGCAACTATTCGAATGATAGATATAGCTGTCAACTTCACAGATGGAATGTTCAAAGGAATCTACAACGGCAAGCAATGTCACGTCTCAGATATTGCAACCGTCTTGAGCAGAGCTTGGAGTGCGGGGGTCGACCGAATTATTGTAACTGGTGGATCCCTTGAGGAATCAAGGGAAGCTCTTGCAATTGCAGAAACAGATGGACGGCTTTTCTGCACGGTTGGTGTGCATCCAACACGTTGTAAGGAATTTGAGGAGGGAGGAGATCCAGGAAAGCATTTTCAGGCTCTTTTGTCATTGGCTAAAGAAGGAATTCAAAAAGGAAAGGTGGTTGCAGTTGGAGAATGTGGATTAGACTATGATAGGCTTCACTTTTGCCCTGCTGAGATTCAAAAGAAGTATTTCGAGAAGCAATTTGAATTAGCACATATCACAAAACTGCCTATGTTTTTGCACATGCGAGCAGCTGCTGCAGATTTTTGTGAATTAGTTGAGAGAAATAAAGACAGGTTCACTGGTGGAGTGACTCATTCATTTACTGGTAGTGCAGAAGATTGTATTAAGCTTCTCTCATTTGATAATATGTACATAGGCATAAATGGCTGCTCGTTGAAGACAACTGAGAACCTTGATGTAGTGACAGGTATTCCTGTTGAGAGAATGGTGATTGAAACAGACTCACCATACTGTGAAGTCAAGAACACTCATGCAGGAATTGGATTTGTTAAATCTACATGGCCCTCTAAAAAGAAAGAGAAGTATGATCAAGAGTGCATTGTCAAAGGCCGGAATGAACCTTGTTTAGTTAGGCAAGTTCTTGAGGTGGTTGCTGGTTGTAAAGGCATCAACGACTTGGGTAAACTGAGTGAAACATTGTACCACAACACTTGCAGGGTTTTTTTCCCGCATGACCTGGACTCTGCAGCAGATGCTCTTCTAGCCGGTGGGGATACCTCTTAG 1083 0.4275 MHVLFFKSFLCLTQPGLVNKAANPNVHFGSPLRGIRFLRGGMATIRMIDIAVNFTDGMFKGIYNGKQCHVSDIATVLSRAWSAGVDRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCKEFEEGGDPGKHFQALLSLAKEGIQKGKVVAVGECGLDYDRLHFCPAEIQKKYFEKQFELAHITKLPMFLHMRAAAADFCELVERNKDRFTGGVTHSFTGSAEDCIKLLSFDNMYIGINGCSLKTTENLDVVTGIPVERMVIETDSPYCEVKNTHAGIGFVKSTWPSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGCKGINDLGKLSETLYHNTCRVFFPHDLDSAADALLAGGDTS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0999 360 PANTHER TATD FAMILY DEOXYRIBONUCLEASE 46 347 - -
Lele05g0999 360 Pfam TatD related DNase 68 341 IPR001130 GO:0016788
Lele05g0999 360 FunFam Putative tatD related deoxyribonuclease 42 348 - -
Lele05g0999 360 SUPERFAMILY Metallo-dependent hydrolases 47 342 IPR032466 -
Lele05g0999 360 CDD TatD_DNAse 47 342 IPR001130 GO:0016788
Lele05g0999 360 Gene3D - 40 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0999 Lele-ChrLele05 6180611 6184602 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0999 05 6180611 6184602 Lele07g1037 07 6244468 6249827 hybridization
Lele05g0999 05 6180611 6184602 Lele08g0849 08 5347923 5350958 hybridization