Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0989 ATGGAAGTTCTTACAACAGTCACTTCACTTTGGTGGTCACGACCAACTGGGGATATGGTTTCTCCTACCAGTAAATCATCGTCCAGAAGCGAAGTTCCAAATGTTCCAGAGATTGTTCAAAATAGCCCACCCGAGATATTGAGAATCGATAAGGTAGATACGAAACCAATACAGGAGATAAAACCACCTCAACCTCAAAAACAAGACGAAGAGACTAAATCTTCCAAGCCACCAATGGAGGAATCAAGACAAACCCAGTCGGTGAAGCTGAGGCAAACGGAAGAGGGTGGACCGATTCCGACGAGTGTACAAAAGGAAGAGATTATTCAACAAGTGGAACCTAAAAAACCAAAGAGGCCCCACAGGGTGAAGAGGCTCGCATCTGCAGGGCTGCAAGCAGATTCTGTTTTGCAAACAAAAACAGGGGGTGAACTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGCTATCGATTTTGGATTGTCTACATTTTTCAAACCAGTCTCAAATGATGCAGGAGAAACCTTCTCAGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGGGTGCCTCCATTTTGGGCTGTGGTAACAGAAACAGAGGAGGATATATTCACGGAGGTTTTGGAAGGGAAGCTTGATTTCTCATCATATCCTTGGCCCAAAATCTCAGACGGTGCTAAAGACTTAGTGAGGAAGATGCTTACTAGAGATCCAAGAGAACGGGTAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGAGTTGATGGAGAAGCTCCAGACAAACCTCTTGATTCAGCGATCTTGAGTCGGTTGAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATTTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACATTCGAAGAACTAAAGAATGGACTGAAAAGATTTGGTGCTGATCTGAATGAAGCAGAAATACATTATCTAATGCAAGCCGCAGATGTTGATAACAGTGGAACAATTGACTACCGAGAATTCATAGCTGCCACATTGCATTTAAATAAAATTGAGAGAGAAGACCACTTAGTTGCAGCATTCTCATACTTTGATAAAGATGGAAGCGGCTATATCACACCAGATGAGCTTCAACAAGCTTGCCAAGAATTTGGCATAGAAGATTTCCACTTGGAAGAAATCATCAGAGAAGCAGATCAAGATAACGTGAGGCAGGTTGGGTTGTTCTGTATACTTGTGGATAGGTTGCTTCATGGGCATTGTGGTCCTAATCTTATTATTAATGATGATTTGTGA 1458 0.4198 MEVLTTVTSLWWSRPTGDMVSPTSKSSSRSEVPNVPEIVQNSPPEILRIDKVDTKPIQEIKPPQPQKQDEETKSSKPPMEESRQTQSVKLRQTEEGGPIPTSVQKEEIIQQVEPKKPKRPHRVKRLASAGLQADSVLQTKTGGELFDRIVERGHYTERKAAKLARTIAIDFGLSTFFKPVSNDAGETFSDVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAVVTETEEDIFTEVLEGKLDFSSYPWPKISDGAKDLVRKMLTRDPRERVTAHEVLCHPWIRVDGEAPDKPLDSAILSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDTDNSGQITFEELKNGLKRFGADLNEAEIHYLMQAADVDNSGTIDYREFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEEIIREADQDNVRQVGLFCILVDRLLHGHCGPNLIINDDL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0989 485 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Lele05g0989 485 MobiDBLite consensus disorder prediction 1 126 - -
Lele05g0989 485 FunFam Calcium-dependent protein kinase SK5 198 296 - -
Lele05g0989 485 MobiDBLite consensus disorder prediction 64 78 - -
Lele05g0989 485 Gene3D - 317 457 - -
Lele05g0989 485 Pfam Protein kinase domain 169 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0989 485 MobiDBLite consensus disorder prediction 1 37 - -
Lele05g0989 485 FunFam Calcium-dependent protein kinase 1 299 466 - -
Lele05g0989 485 SUPERFAMILY Protein kinase-like (PK-like) 140 312 IPR011009 -
Lele05g0989 485 Pfam EF-hand domain 412 437 IPR002048 GO:0005509
Lele05g0989 485 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Lele05g0989 485 Pfam EF-hand domain pair 339 399 IPR002048 GO:0005509
Lele05g0989 485 ProSitePatterns EF-hand calcium-binding domain. 347 359 IPR018247 -
Lele05g0989 485 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Lele05g0989 485 PANTHER SERINE/THREONINE-PROTEIN KINASE 168 456 - -
Lele05g0989 485 SMART efh_1 374 402 IPR002048 GO:0005509
Lele05g0989 485 SMART efh_1 410 438 IPR002048 GO:0005509
Lele05g0989 485 SMART efh_1 338 366 IPR002048 GO:0005509
Lele05g0989 485 ProSiteProfiles EF-hand calcium-binding domain profile. 334 369 IPR002048 GO:0005509
Lele05g0989 485 SUPERFAMILY EF-hand 330 456 IPR011992 -
Lele05g0989 485 ProSiteProfiles Protein kinase domain profile. 1 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0989 485 Gene3D - 307 400 - -
Lele05g0989 485 Gene3D Transferase(Phosphotransferase) domain 1 121 294 - -
Lele05g0989 485 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Lele05g0989 485 SMART serkin_6 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0989 Lele-ChrLele05 6109013 6112118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0989 136 456 EF-hand Containing Proteins AT5G04870 69.577 4.89e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele05g0989 Pkinase 6.5e-27 CL0016