Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0983 ATGAATGAGGTGAGGGCGATTAATGTACATCTATCTCTACGTAATCAACAGGTGAGGATCTCTCTAAAGTTAAAGGCAGCTATTTCTCTGTCGTTCTTCAATTCTGGCCTCGCCTTCTTCTTCTACTTCTCATCACAACTTTTTTTTCCCGCCAGAAACGAGTGGAGATCGACAGGAATGGAGAAGACTAATACGAGTGGGTTGGCGAGGACGAAGTCGGAGCAGCTAGTGGAGACGATGCTTGCAGAGCTGAAGTCGGCGCCATCGAGCGACTCAATAAACGGGATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCAAGTAGGAGGATGTCGCCGGTAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGACGAAGTAGGAAGCGGAGCCGCCCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACGCTTACTCCTGATGAAATCACTGACTCGAAGCCCTTCAGGGACCAAGACATCCCTGAGGATATTGAAGCTGGAACTTGCCACTTCAAGTTTCAAACGGAAACCACTTTGCCTATTTTTCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTAATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATTACTGGTTGCGTGAATCCAGGCGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGTGGCCGGTTGATTCAGTCCACTGCTGGTGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTAACTGTGGAAGAAACACTTACGTACTCAGCCCGTCTGCGACTTCCCGATACATTCACAAAGGACCAGAAGGAAAAACGAGCCTTGGATGTCATCTATGAGCTTGGATTAGAAAGGTGCAAAGACACTATGATCGGTGGCTCTTTTGTTCGCGGGGTGTCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAGCCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACATGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAAAGGCAGCTTGCTTTACTTTGGCAAAGCATCTGAAGCAATGCCCTATTTCCAATCTATAGGATGCTCCCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCCTCTGAGTTAGAGGATAAAGTGCAGATGGGAAATGCAGAAGTTAGAACAAAGAATGGGAAACCGTCACCAGCAATGGTACAAGAGTATCTAGCGGAAGCATACGAGTCTCGAGTTTCTGAAACAGAGAAGAGAAAGCTAATGGTCCCCATCCCACTTGATGAATCACTGAAGTCTAAGGTTTGTTCTCCTAAAAGACAATGGGGTGCAAGGTGGTGTGAGCAGTATTCCATACTGTTCTGCAGAGGAATAAAAGAGCGGAGGCACGACTATTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCTACTGCTGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAACCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGGCTAAGTGCATATTTTGTGGCTAGGACTACAAGTGATGTACCGTTGGACTTAATACTACCAGTTCTGTTCCTGCTGGTTGTCTATTTCATGGCCGGTCTGAGACTAAGTGCCGACTCCTTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTCGCCATAGGGGCCACACTAATGGACATGAAGAAAGCAACAACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTGGCCGGAGGATTTTTCGTAAAGGAAGTGCCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACATACAAACTTTTGCTGAAAGTGCAATATGGAGGGCTCTCGCGAGGCATAAATGGGATGAGAATTGACGATGGTTGGACAGAGGTTGGTGCTCTGATAGCAATGGTTTTTGGTTATCGGTTATTAGCGTACCTTTCGCTGCGGCGGATGAAGCTTCCATGCGGAGCTTAG 2397 0.4614 MNEVRAINVHLSLRNQQVRISLKLKAAISLSFFNSGLAFFFYFSSQLFFPARNEWRSTGMEKTNTSGLARTKSEQLVETMLAELKSAPSSDSINGIMDSGGSGGTLSRKSSRRMSPVGKNSHIRKSRSAQIKVDLDEVGSGAALSRASSASLGLSFSFTGFTLTPDEITDSKPFRDQDIPEDIEAGTCHFKFQTETTLPIFLKFKDVSYKVVIKGMTTSEEKDILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVEETLTYSARLRLPDTFTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAEVRTKNGKPSPAMVQEYLAEAYESRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSADSFFYSILTVFLCIVAAQGLGLAIGATLMDMKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGA 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0983 798 ProSitePatterns ABC transporters family signature. 348 362 IPR017871 GO:0005524|GO:0016887
Lele05g0983 798 FunFam ABC transporter G family member 22 212 442 - -
Lele05g0983 798 Pfam ABC-2 type transporter 405 510 IPR043926 GO:0140359
Lele05g0983 798 SMART AAA_5 234 425 IPR003593 -
Lele05g0983 798 MobiDBLite consensus disorder prediction 92 121 - -
Lele05g0983 798 Pfam ABC transporter 225 376 IPR003439 GO:0005524
Lele05g0983 798 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 155 786 - -
Lele05g0983 798 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 202 448 IPR003439 GO:0005524
Lele05g0983 798 Gene3D - 201 441 IPR027417 -
Lele05g0983 798 Pfam ABC-2 type transporter 544 752 IPR013525 GO:0016020|GO:0140359
Lele05g0983 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0983 Lele-ChrLele05 6077509 6083886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0983 168 462 Calmodulin-binding Proteins AT2G36910 27.907 3.20e-15 78.6