Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0982 ATGGGTAATAAACCAAGCGGGAATGGCTTCTTGGAATCTGTTTCGGCCGCTGTTTTTCGAGACCGCCCTCCGGGTGGCAGGCTTCCTACGCCGGACGCCTCTTCCACCGATAAAGCCCCGGCAAATGCAGGTTCTGATCCTTCTGGCTCAGGTCAGAGTAGATCACCTGAAACGTTGAAGATCGCCGATGTCGAATCGGAACCACGGGAGCCTGAAAATCCTCCCGCTGATGGCGCGAAATCTGACAAATCCACTCATGTTAAAAGGGCGTCCAGTGTTGGACGTCAAATTGAATCGGTGCTGGGCAGAAAAACTCAAAACTTGAAGGATGTGTATAGTCTGGGGCGGAAGATAGGACAAGGGCAATTTGGGACGACATTCTTTTGCTTAGAGAATACAACCGGAAAAGAGTTCGCTTGTAAAACGATCGCCAAGAGAAAATTGACAACTATTGAGGACGTGGAAGATGTTAGAAGGGAGATTCAGATAATGCACCATTTGGCTGGTCACCCCAATGTGATACAAATATTTGGTGCTTATGAGGACGCCGTTGCTGTCAATCTTGTTATGGAATTTTGTTCTGGTGGGGAGCTTTTTGATAGGATCATACAGAGAGGACACTACACTGAGAGAAAAGCAGCTCAGCTCGCAAGAGTAATGGCCCATGTTGTGGAGGCCTTCCATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCGGAGAATTTTCTGTTCGCTAGCCAGGACGAAGATTCACTTCTCAAGACAATAGATTTTGGGCTTTCCGTGTTCTTCCAACCGGGTCAAACATTCACTGATGTAGTTGGCAGCCCGTATTATGTGGCACCTGAAGTTCTGCTGAAGCACTATGGTCAAGAATGTGATGTTTGGAGTGTTGGGGTAATCATTTATATATTACTATGTGGAGTTCCGCCATTTTGGGATGAGACCGAGGAAGGAATTTTTGAGCAAGTTTTGAGAGGAGAACTTGACTTTATCTCTGAACCATGGCCTAGCATTTCTGAGAGTGCAAAGGATCTTGTCCGTAGAATGCTAATAAGAGACCCTAAAAAGAGGATGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAGGTGGACGGTGTTGCTCCTGACAAACCTCTTGATTCTGCTGTCTTGTCTCGTTTAGAGAAATTTTCTGCTTTGAACAAGCTTAAGAAGATGGCCATTCGAGTAATTGCTGAAAGTCTGTCGGAAGAGGAAATTGGAGGGCTGAAAGAAATGTTCAAGATGATAGACGCAGATAATAGTGGACACATTTCTCTAGAGGAACTGAAAAATGGATTGGAGAAAGCGGGTGCCAATCTCAAGGAACCTGAAATTGTTGGCTTAATGCAAGCGGCAGACATTGATAATAGTGGTACCATCGACTATGGTGAATTCATAGCAGCCATGCTTCATAAGAACAAGGTTCATAGGGAGGAGCATCTATTTGCAGCTTTCAACTACTTTGACAAAGATGGGAGTGGGTACATTACACGAGATGAACTTGAACAGGCCTGCGAACAGTTTGGTCTGCAAGATGTTCAACTAGATGACCTGATAAAAGAAATTGACCGGGATAATGATGGGCGAATTGATTACAGTGAGTTTGTTGCAATGATGGAAGACGCTGGTATTGGCAAAAAGGGACTAGAAAATACAATGAGCAAAATTGCGGATCTGTCAATGTATGAGATTTATTGCTCCGATCTGGACCTTCACTTTGTCCCTTCTGGCTTAGGCGTCACCTTAGCTTCTCAACAAGCAGCACCATCTAATTAG 1803 0.4515 MGNKPSGNGFLESVSAAVFRDRPPGGRLPTPDASSTDKAPANAGSDPSGSGQSRSPETLKIADVESEPREPENPPADGAKSDKSTHVKRASSVGRQIESVLGRKTQNLKDVYSLGRKIGQGQFGTTFFCLENTTGKEFACKTIAKRKLTTIEDVEDVRREIQIMHHLAGHPNVIQIFGAYEDAVAVNLVMEFCSGGELFDRIIQRGHYTERKAAQLARVMAHVVEAFHSLGVMHRDLKPENFLFASQDEDSLLKTIDFGLSVFFQPGQTFTDVVGSPYYVAPEVLLKHYGQECDVWSVGVIIYILLCGVPPFWDETEEGIFEQVLRGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVDGVAPDKPLDSAVLSRLEKFSALNKLKKMAIRVIAESLSEEEIGGLKEMFKMIDADNSGHISLEELKNGLEKAGANLKEPEIVGLMQAADIDNSGTIDYGEFIAAMLHKNKVHREEHLFAAFNYFDKDGSGYITRDELEQACEQFGLQDVQLDDLIKEIDRDNDGRIDYSEFVAMMEDAGIGKKGLENTMSKIADLSMYEIYCSDLDLHFVPSGLGVTLASQQAAPSN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0982 600 Gene3D Transferase(Phosphotransferase) domain 1 198 377 - -
Lele05g0982 600 CDD EFh 489 548 IPR002048 GO:0005509
Lele05g0982 600 CDD STKc_CAMK 111 369 - -
Lele05g0982 600 ProSiteProfiles EF-hand calcium-binding domain profile. 413 448 IPR002048 GO:0005509
Lele05g0982 600 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Lele05g0982 600 ProSitePatterns Protein kinases ATP-binding region signature. 118 145 IPR017441 GO:0005524
Lele05g0982 600 SUPERFAMILY Protein kinase-like (PK-like) 112 371 IPR011009 -
Lele05g0982 600 ProSiteProfiles EF-hand calcium-binding domain profile. 523 554 IPR002048 GO:0005509
Lele05g0982 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 104 544 - -
Lele05g0982 600 FunFam Calcium-dependent protein kinase 1 378 552 - -
Lele05g0982 600 SUPERFAMILY EF-hand 410 548 IPR011992 -
Lele05g0982 600 SMART efh_1 417 445 IPR002048 GO:0005509
Lele05g0982 600 SMART efh_1 523 551 IPR002048 GO:0005509
Lele05g0982 600 SMART efh_1 489 517 IPR002048 GO:0005509
Lele05g0982 600 SMART efh_1 453 481 IPR002048 GO:0005509
Lele05g0982 600 ProSiteProfiles Protein kinase domain profile. 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0982 600 MobiDBLite consensus disorder prediction 60 89 - -
Lele05g0982 600 FunFam Calcium-dependent protein kinase SK5 198 382 - -
Lele05g0982 600 FunFam Calcium-dependent protein kinase 1 114 197 - -
Lele05g0982 600 Pfam Protein kinase domain 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0982 600 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Lele05g0982 600 Gene3D - 378 551 - -
Lele05g0982 600 Pfam EF-hand domain pair 487 549 IPR002048 GO:0005509
Lele05g0982 600 Pfam EF-hand domain pair 418 478 IPR002048 GO:0005509
Lele05g0982 600 MobiDBLite consensus disorder prediction 35 59 - -
Lele05g0982 600 SMART serkin_6 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0982 600 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Lele05g0982 600 ProSitePatterns EF-hand calcium-binding domain. 426 438 IPR018247 -
Lele05g0982 600 Gene3D Phosphorylase Kinase; domain 1 114 197 - -
Lele05g0982 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lele05g0982 600 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Lele05g0982 600 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Lele05g0982 600 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0982 Lele-ChrLele05 6068241 6072760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0982 1 559 EF-hand Containing Proteins AT2G38910 71.184 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele05g0982 Pkinase 4e-73 CL0016