Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0978 ATGGGTTCTCTTCCCCATATAGTCGAGGACTGCATGGGTTTTCTCCAACTCTACAGCGACGGTTCCATTTACCGAAACAATGACATCAAATTCATGGATTCCATCGTTGAAGATCACTCTGTGCTCTTCAAAGACACTCTCTTTCACAAAAGTTTCGATCTTAATCTTCGAATTTACAAACCCCAACCATCCTCTGATTCTGATCTCACCAAAATGCCTCTGGTAATGTTCTTCCACGGCGGAGGCTTCTGTTTTGGCTCGCGTACATGGCCCCACGTCCATAACTGCTGCATCCGCCTCGCTTCTGGGCTTCAGGCGGTGGTGGCGGCGCCGGACTACCGGCTGGCTCCAGAGCACCGGCTTCCGGCGGCGTTGGATGACGCTGTGGAGGCACTGAGATGGGTTCAGAGGATGGCGTCGACAGGGGAGGATGCATGGCTGAATGGTCACGTCGACTTTGACCGTGTGTTTATCTTGGGAGACTCGTCCGGGGGTAATATTGCGCATCATTTGGCGGTTCGGTTTGGACCCGAAGCAAGAGATTTGGATCCGATTCGCGTACGAGGTTATATGCTGTTGGCGCCATTTTTCGGCGGGGAGGTTAGAACCAGCTCCGAGGAGGGTCACCGGGAACAGGTTTTGAGCCTAGAAATACTTGACAGATTTTGGAGACTTTCGATGCCAGTTGGAAAGAACAGAGACCATTCATTGGCTAATCCATTTGGACCAGAGAGTCCAGATCTGGGGCAGGTGAAGCTCCATCCTATGTTGGTGATCGTAGGGGGAAGAGAATTGCTGAAGGATAGGGCAAAAGATTATGCAGAAAAGCTAAAAGAACTAGGCAAGAATATTGAATATGTTGAGTTTGAGGGAAAAGAACATGGCTTTTTCTCGCATGATTCTTACTCAGATGTTGCAGAAAAGGTCGTGCAAATCATTCAACGATTCCTGCTTCAAAATTCTACTTAA 969 0.4902 MGSLPHIVEDCMGFLQLYSDGSIYRNNDIKFMDSIVEDHSVLFKDTLFHKSFDLNLRIYKPQPSSDSDLTKMPLVMFFHGGGFCFGSRTWPHVHNCCIRLASGLQAVVAAPDYRLAPEHRLPAALDDAVEALRWVQRMASTGEDAWLNGHVDFDRVFILGDSSGGNIAHHLAVRFGPEARDLDPIRVRGYMLLAPFFGGEVRTSSEEGHREQVLSLEILDRFWRLSMPVGKNRDHSLANPFGPESPDLGQVKLHPMLVIVGGRELLKDRAKDYAEKLKELGKNIEYVEFEGKEHGFFSHDSYSDVAEKVVQIIQRFLLQNST 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0978 322 PANTHER ARYLACETAMIDE DEACETYLASE 12 297 - -
Lele05g0978 322 Gene3D alpha/beta hydrolase 15 321 IPR029058 -
Lele05g0978 322 Coils Coil 263 283 - -
Lele05g0978 322 Pfam alpha/beta hydrolase fold 75 297 IPR013094 GO:0016787
Lele05g0978 322 SUPERFAMILY alpha/beta-Hydrolases 4 317 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0978 Lele-ChrLele05 6047081 6050495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0978 7 316 Carbohydrate Esterase AT5G16080 33.648 5.82e-57 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0978 05 6047081 6050495 Lele13g2025 13 27504083 27507281 CCT
Lele05g0978 05 6047081 6050495 Lele14g1959 14 25847884 25850261 CCT
Lele05g0978 05 6047081 6050495 Lele15g0379 15 2181212 2182840 CCT
Lele05g0978 05 6047081 6050495 Lele16g0400 16 2181150 2182773 CCT
Lele05g0978 05 6047081 6050495 Lele05g0978 05 6047081 6050495 ECH
Lele05g0978 05 6047081 6050495 Lele06g0838 06 5196272 5199469 ECH
Lele05g0978 05 6047081 6050495 Lele07g1018 07 6112503 6115878 hybridization
Lele05g0978 05 6047081 6050495 Lele08g0827 08 5208267 5210896 hybridization