Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0966 ATGTGTTGGGCACTGGGCAGGATGGAGACTCAGGCGAAGCATGTAGTGGTTGTTAAAGTCATTGGTCGTACTGGTTCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACCGGTATATCATGAGGAATGTGAAAGGACCAGTGAGGGAAGGAGACATTCTCACCCTACTTGAGTCTGAAAGAGAAGCAAGGAGATTGCGCTAG 219 0.484 MCWALGRMETQAKHVVVVKVIGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0966 72 Pfam Ribosomal protein S28e 11 71 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele05g0966 72 SUPERFAMILY Nucleic acid-binding proteins 8 72 IPR012340 -
Lele05g0966 72 CDD S1_S28E 13 72 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele05g0966 72 Gene3D - 6 72 IPR012340 -
Lele05g0966 72 Hamap 30S ribosomal protein S28e [rps28e]. 8 72 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele05g0966 72 ProSitePatterns Ribosomal protein S28e signature. 63 71 IPR028626 -
Lele05g0966 72 PANTHER 40S RIBOSOMAL PROTEIN S28 8 72 IPR000289 GO:0003735|GO:0005840|GO:0006412
Lele05g0966 72 FunFam 40S ribosomal protein S28 6 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0966 Lele-ChrLele05 5980216 5980434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0966 8 72 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 86.154 3.25e-34 109