Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0961 ATGTCACAGTTACTGTGTAAGCGTTGGATCAGGTTGGTTACATCATTCAGAACAGCAAATTGTGGGAAGAGACTTCAACTCTCAGCATTCGCCTTTTCCACTACCTCTGCTGAGCATGACAGTCCGAGTCGACCCAGTCCGCCTCCAATTCGAGTGGGTTTTACCGAGTCGGCTGGGCGTGGTGTATTCGCCACTCGAGCAATCGGAGCCGGAGATCTCATACATACCGCCAAACCATTTCTGAGCCATCCTTCTCCCTCCGCTATCCACACTGTCTGTTATGTTTGCCTCAGAAAGCTCCGGAGTTCGAGCAAATCGGAAGATGCCGGCGTATCATTTTGCAGTGAAGAATGCAAAGAACGTTCTAAGGAGTTTTATGATGTTGAGATGAAAGCGAATTGGATGGCTTTTGATGATTATTGCCGGACCCAGGGTTTGAAATATCCATTTCTGGTAAAACGGTTGGCTTGCATGATCATATCAAGAGTTGTCAGCATAAACAGTCTTGACATACTTCAACCTGCCAGTTTGACTCCTGAGATGATATTAGAGTTGGAAGAGGGTTTTGCCTTGTTGAGGAATGCCTTCACGAAGACACTTATGGCAGATGAAGATATTGCTTTTCTAAGCAAGAAATGGTACATTAGTGTTCTGGCTCGAATTCGTATTAATGCATTTCGAGTTGAACTGGCTGGAGGCTTGTATGAAGATCTGCTATCATCTGCAGTTGCATCTGTAGAAGCTGAAGCTGCTGTTGGAAATGCCATCTACATACTTCCATCATTCTACAATCATGACTGTGATCCTAATGCACACATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCCGTAACGTTGAGAATGGCGAAGAACTAAGAATCTGCTACATTGATGCCAGCCTGGACCATGATGCTCGGCAAGAACTTTTGCTTCAAGGATTTGGTTTTCAATGCAATTGCAATAGATGCTTGCAAGGCGACTAA 993 0.4451 MSQLLCKRWIRLVTSFRTANCGKRLQLSAFAFSTTSAEHDSPSRPSPPPIRVGFTESAGRGVFATRAIGAGDLIHTAKPFLSHPSPSAIHTVCYVCLRKLRSSSKSEDAGVSFCSEECKERSKEFYDVEMKANWMAFDDYCRTQGLKYPFLVKRLACMIISRVVSINSLDILQPASLTPEMILELEEGFALLRNAFTKTLMADEDIAFLSKKWYISVLARIRINAFRVELAGGLYEDLLSSAVASVEAEAAVGNAIYILPSFYNHDCDPNAHIIWIDNADAKLKALRNVENGEELRICYIDASLDHDARQELLLQGFGFQCNCNRCLQGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0961 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 328 - -
Lele05g0961 330 SMART set_7 48 306 IPR001214 GO:0005515
Lele05g0961 330 Gene3D SET domain 61 326 IPR046341 -
Lele05g0961 330 CDD SET_SMYD 253 326 - -
Lele05g0961 330 Pfam SET domain 59 299 IPR001214 GO:0005515
Lele05g0961 330 ProSiteProfiles SET domain profile. 48 300 IPR001214 GO:0005515
Lele05g0961 330 SUPERFAMILY SET domain 47 326 IPR046341 -
Lele05g0961 330 Gene3D - 140 225 - -
Lele05g0961 330 Gene3D - 92 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0961 Lele-ChrLele05 5948152 5951140 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele05g0961 SET 1.6e-12 No_clan