Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0958 ATGGGTGTGGATTCGTTATCATCGGAGTCGAGCTCCGATCTAGAGGAGCAGATCTCACAACTCATGCAGTGCAAGCCACTGTCGGAGCAACAGGTTAGAGTTCTGTGTGAGAAGGCTAAAGAGATTTTAATGGATGAGAGCAACGTCCAGCCTGTGAAAAGCCCTGTGACAATATGTGGCGATATTCACGGGCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACTAACTACTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTCCTTGTGGCACTAAAAGTGCGGTATCCCCAGCGCATAACTATTCTTCGTGGGAACCATGAAAGTCGCCAGATCACTCAAGTATATGGATTTTATGATGAATGCCTAAGAAAGTATGGTAGTGCTAATGTTTGGAAGATCTTCACAGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAGTCAGAGATATTTTGTCTGCATGGTGGACTCTCTCCTTCCATTGAGACTCTAGATAGTGTGAGGAACTTTGATCGTGTTCAGGAGGTTCCTCATGAAGGGCCCATGTGTGATCTATTATGGTCTGACCCAGATGACAGATGTGGTTGGGGAATTTCTCCTCGTGGTGCTGGATATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACGACCTTAAGTTGATCGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCACGAACAAAAGGTGGTTACCATATTTAGCGCTCCAAATTACTGTTATCGGTGCGGGAACATGGCTTCCATATTGGAAGTTGATGATTGCAAGGACCACACTTTCATCCAGTTTGAACCTGCTCCTAGGAGGGGAGAACCTGATGTTACCCGTAGAACACCTGATTACTTCCTTTGA 942 0.4427 MGVDSLSSESSSDLEEQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDSVRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNDLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKDHTFIQFEPAPRRGEPDVTRRTPDYFL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Lele05g0958 313 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Lele05g0958 313 SUPERFAMILY Metallo-dependent phosphatases 10 298 IPR029052 -
Lele05g0958 313 CDD MPP_PP2A_PP4_PP6 17 297 - -
Lele05g0958 313 FunFam Serine/threonine-protein phosphatase 6 313 - -
Lele05g0958 313 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Lele05g0958 313 SMART pp2a_7 27 297 IPR006186 GO:0016787
Lele05g0958 313 Pfam Calcineurin-like phosphoesterase 55 246 IPR004843 GO:0016787
Lele05g0958 313 Gene3D - 6 313 IPR029052 -
Lele05g0958 313 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 12 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0958 Lele-ChrLele05 5931625 5936176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0958 19 243 Calmodulin-binding Proteins AT5G63870 34.457 6.97e-33 121