Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0954 ATGCTGAGCGTGCTACGCGTGCACCTACCCTCTGATATACCCATTGTTGGATGTGAGCTTACGCCGTACGTGCTCCTACGGCGACCAGACAAGCCTGTTACCACCGACGATGTGCCAGAGTCAACCCCAATAGACGGCATTTTTCTACGTTACAAGTGGTATCGTGTGCAAAGTGATAAAAAGGTTGCAGTCTGCAGCGTACATCCATCTGAACAGGCCACACTGCAGTGCCTTGGTTGTGTAAAAGCCAAAATACCTGTTTCGAAAAGCTACCATTGCGCACCAAAGTGCTTTTCAGATGCATGGCAGCATCATCGTGTTCTTCATGATCGTGCTGCAAGTGCTGTTAATGAAAACGGTAATGAGGAAGAGGAGGTGTTTGGTCGCTTTAATAGTTCTGAATCTGGGGCACTGAGTAATAGCTTATCCAGCTCTGCATCAAGTGCTGCTTTGACAAATGGGTCAGCACCGTTGTATCCATCAGCTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATCGAAAACATATACCCCAACAGTTGATGATATTGGTCATGTCTTGAAATTTGAGTGTGCAGTAGTGGATGCAGAGACAAAACTTCCTGTGGGGCATGTCAACACCATACTAACCTCCCGCGTCATTCCTGCACCATTGCCTAGTCCACGTCACCTGATACCTGTTGATGGGATGGGACCTTTAGATGCTGACGGACGTATAACATCTTCAGGAACTTTTACTGTTCTATCATACAACATTTTGTCTGATGCATATGCCTCAAATGATTTATATAGCTACTGCCCTTCATGGGCTCTTTCTTGGCCCTATCGTAGACAAAATTTGTTGAGAGAAATAGTTGGTTATCGTGCAGACATTATTTGCCTTCAAGAGGTCCAAAGCGATCATTATGAGGAATTTTTTTCTCCCGAATTGGACAAACATGGATATTATGGTTTATATAAGAGGAAAACAAATGAGGTATACGGTGGTAACAGCAATACAATTGATGGCTGTGCAACATTTTTCCGCCGGGACAAATTTTCACATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCTCAGTCTTTGACAGATGCCATGATTCCAACAACCCAGAAGAAAACTGCTTTAAATCGGCTTGTTAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCGAAAGTTGCCAATCAGCCAATTGATAATCCTGGGAAAAGGCAGCTTCTTTGTGTTGCTAATACACACGTAAACGTTCACCAAGATCTGAAGGATGTCAAACTCTGGCAGGTGCACACTCTTTTAAAAGGGTTAGAAAAGATAGCTGCAAGTGCAGACATTCCAATGCTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCCCCTCATTCACTTCTTGCAATGGGGAAGGTAGATCCGTTGCATCCTGATTTAGCTGTTGATCCTCTCAATATCTTGCGTCCTTATAGCAAGTTGGTTCATCAGCTGCCACTGGTTAGTGCATACTCTTCTTTTGCAAGAACAGCAGGTCTTGGTTTTGAACAGCACAAAAGGAGACTGGACAGTGCAACAAATGAACCCTTGTTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATCTTTTATACAGCGGATTCTTTGGCGTTGATTTGTAAAAGGTCATTTCCAAAGACACGTTAA 1704 0.4308 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKPVTTDDVPESTPIDGIFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCVKAKIPVSKSYHCAPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNSSESGALSNSLSSSASSAALTNGSAPLYPSAVTQRSGGETWIEVGRSKTYTPTVDDIGHVLKFECAVVDAETKLPVGHVNTILTSRVIPAPLPSPRHLIPVDGMGPLDADGRITSSGTFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYGGNSNTIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVANQPIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLAVDPLNILRPYSKLVHQLPLVSAYSSFARTAGLGFEQHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLALICKRSFPKTR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0954 567 CDD Deadenylase_CCR4 252 558 - -
Lele05g0954 567 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 161 555 - -
Lele05g0954 567 Pfam Endonuclease/Exonuclease/phosphatase family 253 559 IPR005135 GO:0003824
Lele05g0954 567 SUPERFAMILY DNase I-like 248 555 IPR036691 -
Lele05g0954 567 FunFam Carbon catabolite repressor protein 4 1 219 563 - -
Lele05g0954 567 Gene3D Endonuclease/exonuclease/phosphatase 223 566 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0954 Lele-ChrLele05 5910894 5915187 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0954 05 5910894 5915187 Lele13g1575 13 24806679 24819472 CCT
Lele05g0954 05 5910894 5915187 Lele14g1497 14 23176576 23182320 CCT
Lele05g0954 05 5910894 5915187 Lele15g0848 15 4925097 4930592 CCT
Lele05g0954 05 5910894 5915187 Lele16g0868 16 4892466 4897276 CCT
Lele05g0954 05 5910894 5915187 Lele05g0954 05 5910894 5915187 ECH
Lele05g0954 05 5910894 5915187 Lele07g0994 07 5982902 5986963 hybridization
Lele05g0954 05 5910894 5915187 Lele08g0808 08 5082122 5087069 hybridization