Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0953 ATGCCAGCTGGACATGGTTTGAGATGTCGAACCAGAGACTCGTTCTCTAGGCCATTCAGGAAGAAGGGTACCATTGCACTGACAACCTACCTTAGAACTTACAAAATCGGCGACTATGTGGACATCAAAGTTAATGGTGCGGTCCACAAGGGCATGCCTCACAAGTTCTACCATGGACGCACCGGCCGTGTCTGGAACGTAACCAAGCGCGCAATTGGTGTCGAAGTGAACAAGCAGGTTGGGAACAGAATAATCAGAAAGAGAATTCATGTGCGTGTGGAGCATGTGATGCCCTCAAGGTGCACTGAGGAGTTTCGTCTGAGGAAAGTTCAGAACGATAAACGGAAGGCTGAAGCAAAGGCCAGGGGAGAAGTCATCAGCACCAAGAGGCAGCCCGTGGGACCTAAGCCTGGTTTCATGGTCGAAGGTGCTACATTGGAGACTGTAACCCCCATTCCATACGATGTCGTCAACGATCTCAAAGGCGGTGTCGGTTTCTACAGAAACTGTGGTTTTGCCTTTTCGGCTGTAGTGTATGTCAAGGGTCAAGCTGTCTTGAGAAGCACAGACATTGAAGCATCAATTTGGGGAGAAAACAGGACAATCAAGCAGAGTTTACACATTAACGATGACAACGCCTTCCATACTCCCTTATCTTCTGCTCATCCTTATTTTCTCAGGGCAGGTGGCTTGGCCTCCGGTGCTCAAGGGGCGAGAATACCTGAACATAGCTGCCACGAACTGCTTCACTTGAGTAATTGTGACCATCAGAACTGCTCTCAAGAGTGCTCTAAACATCCCAATGGCGTCGGACAATGCAAGGCCACCACCTGCTTTTGCACCTTCTATTGCAAGGATCCTCCTCTTTAA 870 0.492 MPAGHGLRCRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKVQNDKRKAEAKARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGVGFYRNCGFAFSAVVYVKGQAVLRSTDIEASIWGENRTIKQSLHINDDNAFHTPLSSAHPYFLRAGGLASGAQGARIPEHSCHELLHLSNCDHQNCSQECSKHPNGVGQCKATTCFCTFYCKDPPL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0953 289 FunFam 60S ribosomal protein L21 99 158 - -
Lele05g0953 289 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lele05g0953 289 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele05g0953 289 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele05g0953 289 Gene3D - 99 156 - -
Lele05g0953 289 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lele05g0953 289 Pfam S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) 242 284 IPR010851 -
Lele05g0953 289 FunFam 60S ribosomal protein L21 1 98 - -
Lele05g0953 289 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0953 Lele-ChrLele05 5906027 5908691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0953 1 163 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 84.663 1.77e-102 295