Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0944 ATGTTGTGCTGCGGAGGTACGGAGGAAGAGAGCAGTGGGCCGCCTGAAAACCCTGCACCACTCAGAGGTGGTAATGCGTATGGAGAAGGGGGTGACAGAGGAGAGCCAAAAAGCAATGCTGCAAAGGCTGGTGCTACCCAAGAAGTATTGCCAATTGAGACCCCAGCAATACCATTGGACGAGTTAAATAGGTTAACGGACAACTTTGGCTCCAACGCTTTGATAGGAGAAGGTTCCTACGGACGAGTCTTTTATGCCAAGTTAAGCGATGGTCAGGATGCTGCAATCAAGAAGCTGGATACCAGTGGTACTTCTACCGCAGAAGAAGACGCCGATTTTGCAGCTCAGTTATCTGTCGTTTCAAGACTGAAGCACGATCACTTTGTGGCGTTGATTGGATATTGCTTGGAGTCAAGTAACAGAATTTTGGTTTATCAACATGCAAGTTTGGGTTCCTTGCACGACGTATTACATGGAAGGAAAGGTGTACAAGGGGCCGAACCAGGTCCATCACTGAGCTGGAACCAGAGAGCAAAGATAGCACTTGGAGCAGCAAAAGGCCTCGAGTTTCTTCATGAGAAGGTTCAACCTTCCGTAGTCCATCGTGATATTAGATCCAGCAACGTCTTACTGTTCGGTGACTATGATGCCAAGATCGCGGATTTTAGCTTGACCAGTCAGGGTTCTGACACAGCAGCTCGCCTACATTCAACTAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGCGACGTTTACAGTTTCGGAGTAGTTCTCTTAGAACTCTTGACAGGAAGAAAACCGGTAGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTAGATCCCAAACTCAACAATGATTACCCGCCAAAGGCAATTGCTAAGTTGGCGGCGGTGGCAGCGTTGTGTGTTCAGTATGAGGCTGACTTCCGGCCCAACATGACAATTGTGGTGAAAGCTTTGCAGCCCCTTCTGAATGCAAAACCAGCTGGCCCAGATCAACCTAGTGCTTAA 1098 0.4845 MLCCGGTEEESSGPPENPAPLRGGNAYGEGGDRGEPKSNAAKAGATQEVLPIETPAIPLDELNRLTDNFGSNALIGEGSYGRVFYAKLSDGQDAAIKKLDTSGTSTAEEDADFAAQLSVVSRLKHDHFVALIGYCLESSNRILVYQHASLGSLHDVLHGRKGVQGAEPGPSLSWNQRAKIALGAAKGLEFLHEKVQPSVVHRDIRSSNVLLFGDYDAKIADFSLTSQGSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDQPSA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0944 365 MobiDBLite consensus disorder prediction 1 45 - -
Lele05g0944 365 SMART tyrkin_6 69 349 IPR020635 GO:0004713|GO:0006468
Lele05g0944 365 Gene3D Transferase(Phosphotransferase) domain 1 149 359 - -
Lele05g0944 365 Gene3D Phosphorylase Kinase; domain 1 34 147 - -
Lele05g0944 365 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0944 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 357 - -
Lele05g0944 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Lele05g0944 365 PIRSF ILK 32 357 - -
Lele05g0944 365 FunFam PTI1-like tyrosine-protein kinase 3 149 358 - -
Lele05g0944 365 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Lele05g0944 365 SUPERFAMILY Protein kinase-like (PK-like) 50 349 IPR011009 -
Lele05g0944 365 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0944 Lele-ChrLele05 5803741 5805467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0944 46 356 Receptor kinase-like Gene Family AT3G58690 45.513 6.47e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele05g0944 PK_Tyr_Ser-Thr 1.1e-43 CL0016