Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0932 ATGAGCAGTAGAATGCACTTTTGTTGGTTGGTTAAAGCTCGACTGTTAGCAGTCATCTTCATCAGCATCCTCGGTCATATCCAAGTCGACTGTTTTAACCCTTTCAGTTTCCCAACCTTCAAACCAGAAGATCAAAATCGATTAATACTGAGTGAATTTTCGCGTATATTCCGAGATGCCATCCAAGTGACACCTGATGCTTACGGTGAAGACTTGAGGAACAGGTCCGGGAGGGCCTTCTACAATAAGCCATTCAGAGTTTGGAGCAAGAAGAAGAACCAAACTGCATCGTTTAATACCACCTTCGTCCTCAATATCAGCCCCGATACTCCTTCAAACCCAGGCGCAGGCGAAGGTTTGGCCTTCATACTTGCTGCGGACACAAGTCTCCCGCCCAACAGCCATGGAAGATGGCTTGGCATTGTCAATTCTTCCACAAATGGCACTTCTGGTGCAGCCGTATTGGCTGTGGAGTTTGATACCAGAAACAACTCCCCAGAAGATGGCCCAAACGATCATGTTGGCGTGAACGTGAACAGTGCTTACTCCATCAAACAGGTCCCATTACTATCCTTGGGGATCAATATTTCATCTGGCATCAATGTGACGGTGAGAATTCAGTATGATAACGATGTGATTTCTGTCTTCGGTTACATGATGAATGGAACCAAAGCACAGGACATGAAACTCTTGTTGCAATCTCCACCTCTCAATCTCACTTCATATCTCCCAGAGAAGGTATATCTTGGGTTCTCTGCATCCACAAGTAATTTCAATGAGCTGAACTGCATCAGAGCGTGGGAGTTCAATGGTGAAGAGATCGGAGACGGAAATCAAGAGCTACTTTGGGTTTGGATCACAGTGCCAACGGTAGTGGCTATCGCTGGAGCGGTAACATTTTTCTTGATATGGCGGTGGAAACGAAGAAGGGAGATAGCAGAGGACGCGTATCCAAGGATAGAAGACCAGATTAATTGTTCCTCAACGGCTCCAAAGAAGTTCCGGCTGAGGGAGATAAAAAAAGCGACGAGCAATTTCAACGACCAGAACAAGCTCGGCGAAGGTGGTTTCGGAAAAGTGTACAAGGGAATCATGGGAAACAAAGAGATTGCTGTGAAGAGAGTCTCCAAGGATTCACGTCAAGGGAAGCAAGAATTCATAGCAGAAGTCACGACAATAAGTAGCCTTCACCACAAGAATCTGGTTAAACTGATAGGATGGTGCTACGAGGGAAAAGAACTCCTCCTAGTCTACGAGTTCATGCCCAATGGAAGCCTAGACAAGTACCTATTCGGGAGTTCAGATGGATCACCATATCAAAACCTTCACTGGAAAACCAGATACAGTGTAATACACGGTGTGGCCGAAGCCCTCGACTATCTTCACAACGGGTGCGAGAAGAAGGTGATTCACAGGGACATCAAGGCAAGCAATATCATGTTGGACTCAGACTTCAACGCTAAGCTGGGAGACTTCGGACTGGCTCGCACAATCCAAACAAGAAACGAGACGCACCATTCCACGAAAGAAATAGCAGGAACACCAGGTTACATGGCCCCAGAGACGTTTTTGACAGGGAGGGCAACGGTGGAAACAGACGTGTACGCATTTGGGGTTCTGATAATGGAAGCAGTGTGTGGGAAGAGGCCAGGAAACGTGTGTGTTCAGAACGATTACAAGAACAGTATAGTGTACTGGGTGTGGGAGATGTATGGGGAAGGAAGAACATTAGATGGAGTGGATAAGATAATAAAGAAGGAGATAGAGGAAGACGAAGAACGAGTGGAAAGTGTGATAGTGTTGGGGCTGGCTTGTTGCCATCCGAATCCTCACAAAAGGCCGTCGATGAAGAGGGCACTGCAGGTTCTGACAGGCGAGGTGGCTCCGCCAGAGGTACCTAGGGAACGGCCGGCTTTTGTGTGGCCGGCCGCTCCTCCTTCCTTCAACGTAAATGATAACTCCATTAATTCAGCCCAACTCACTCCTCCCTTCACTGAGCTCACGGGCAGATGA 2013 0.4749 MSSRMHFCWLVKARLLAVIFISILGHIQVDCFNPFSFPTFKPEDQNRLILSEFSRIFRDAIQVTPDAYGEDLRNRSGRAFYNKPFRVWSKKKNQTASFNTTFVLNISPDTPSNPGAGEGLAFILAADTSLPPNSHGRWLGIVNSSTNGTSGAAVLAVEFDTRNNSPEDGPNDHVGVNVNSAYSIKQVPLLSLGINISSGINVTVRIQYDNDVISVFGYMMNGTKAQDMKLLLQSPPLNLTSYLPEKVYLGFSASTSNFNELNCIRAWEFNGEEIGDGNQELLWVWITVPTVVAIAGAVTFFLIWRWKRRREIAEDAYPRIEDQINCSSTAPKKFRLREIKKATSNFNDQNKLGEGGFGKVYKGIMGNKEIAVKRVSKDSRQGKQEFIAEVTTISSLHHKNLVKLIGWCYEGKELLLVYEFMPNGSLDKYLFGSSDGSPYQNLHWKTRYSVIHGVAEALDYLHNGCEKKVIHRDIKASNIMLDSDFNAKLGDFGLARTIQTRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLIMEAVCGKRPGNVCVQNDYKNSIVYWVWEMYGEGRTLDGVDKIIKKEIEEDEERVESVIVLGLACCHPNPHKRPSMKRALQVLTGEVAPPEVPRERPAFVWPAAPPSFNVNDNSINSAQLTPPFTELTGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0932 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 331 420 - -
Lele05g0932 670 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Lele05g0932 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lele05g0932 670 Pfam Legume lectin domain 35 274 IPR001220 GO:0030246
Lele05g0932 670 ProSitePatterns Legume lectins beta-chain signature. 155 161 IPR019825 -
Lele05g0932 670 SMART serkin_6 346 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0932 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 31 278 - -
Lele05g0932 670 ProSitePatterns Legume lectins alpha-chain signature. 243 252 IPR000985 -
Lele05g0932 670 Pfam Protein kinase domain 347 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0932 670 CDD lectin_legume_LecRK_Arcelin_ConA 35 270 IPR001220 GO:0030246
Lele05g0932 670 CDD STKc_IRAK 352 625 - -
Lele05g0932 670 SUPERFAMILY Protein kinase-like (PK-like) 328 623 IPR011009 -
Lele05g0932 670 Gene3D - 33 279 - -
Lele05g0932 670 Gene3D Phosphorylase Kinase; domain 1 331 420 - -
Lele05g0932 670 PANTHER - 65 630 - -
Lele05g0932 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 272 IPR013320 -
Lele05g0932 670 FunFam probable L-type lectin-domain containing receptor kinase S.5 421 629 - -
Lele05g0932 670 ProSitePatterns Protein kinases ATP-binding region signature. 352 373 IPR017441 GO:0005524
Lele05g0932 670 ProSiteProfiles Protein kinase domain profile. 346 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0932 Lele-ChrLele05 5739071 5741083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0932 76 639 Receptor kinase-like Gene Family AT5G55830 37.479 3.33e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele05g0932 Pkinase 3.7e-52 CL0016